RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PTPRRQ15256 657 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 CD300EQ496F6 205 aaPredicted RBP5.03□□□□□ -1.6
HMGN1-218ENST00000490032 CCDC93Q567U6 631 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 SLC4A10Q6U841 1118 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 MICALCLQ6ZW33 695 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 SLC17A8Q8NDX2 589 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 SLC30A5Q8TAD4 765 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 POC1BQ8TC44 478 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 LPIN2Q92539 896 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 SCAMP4Q969E2 229 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 TIMP4Q99727 224 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 VRK1Q99986 396 aaPredicted RBP5.03□□□□□ -1.6
HMGN1-218ENST00000490032 SPATA5L1Q9BVQ7 753 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 KLK15Q9H2R5 256 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 SPATA31A3Q5VYP0 1347 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 SETD1BQ9UPS6 1966 aaKnown RBP5.02□□□□□ -1.61
HMGN1-218ENST00000490032 PRSS29PA6NIE9 313 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 FTH1P19P0C7X4 201 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 LPOP22079 712 aaPredicted RBP5.02□□□□□ -1.61
HMGN1-218ENST00000490032 MAPK10P53779 464 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 MC2RQ01718 297 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 TAPT1Q6NXT6 567 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 NSUN7Q8NE18 718 aaKnown RBP5.02□□□□□ -1.61
HMGN1-218ENST00000490032 SNX19Q92543 992 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 PGBD1Q96JS3 809 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 UROC1Q96N76 676 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 GPR35Q9HC97 309 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 PCDH12Q9NPG4 1184 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 POLHQ9Y253 713 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 ENTPD2Q9Y5L3 495 aa5.02□□□□□ -1.61
HMGN1-218ENST00000490032 WDR27A2RRH5 827 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 TOR1BO14657 336 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 SLC16A6O15403 523 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 ARIH2O95376 493 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 WT1P19544 449 aaPredicted RBP5.01□□□□□ -1.61
HMGN1-218ENST00000490032 GRIA3P42263 894 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 RECQLP46063 649 aaPredicted RBP5.01□□□□□ -1.61
HMGN1-218ENST00000490032 KRTAP1-1Q07627 177 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 TCF15Q12870 199 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 TMEM240Q5SV17 173 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 KAZNQ674X7 775 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 GRASPQ7Z6J2 395 aaPredicted RBP5.01□□□□□ -1.61
HMGN1-218ENST00000490032 PEG10Q86TG7 708 aaKnown RBP5.01□□□□□ -1.61
HMGN1-218ENST00000490032 ARHGEF25Q86VW2 580 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 MIER2Q8N344 545 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 PRR18Q8N4B5 295 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 C3orf20Q8ND61 904 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 MYCBPAPQ8TBZ2 947 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 FBXL20Q96IG2 436 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 TRIB1Q96RU8 372 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 SMOQ99835 787 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 BRD9Q9H8M2 597 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 GNL3LQ9NVN8 582 aaKnown RBP5.01□□□□□ -1.61
HMGN1-218ENST00000490032 ETAA1Q9NY74 926 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 CFAP97Q9P2B7 532 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 ARPP21Q9UBL0 812 aaPredicted RBP5.01□□□□□ -1.61
HMGN1-218ENST00000490032 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGN1-218ENST00000490032 COL4A3BPQ9Y5P4 624 aa5.01□□□□□ -1.61
HMGN1-218ENST00000490032 LRRC3CA6NJW4 275 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 ADM5C9JUS6 153 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 ORC4O43929 436 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 RBMXL2O75526 392 aaKnown RBP5□□□□□ -1.61
HMGN1-218ENST00000490032 CHEK2O96017 543 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 GJB1P08034 283 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 PPP3CBP16298 524 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 CCND1P24385 295 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 PRDX5P30044 214 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 NPTX2P47972 431 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 HNRNPMP52272 730 aaKnown RBP eCLIP5□□□□□ -1.61
HMGN1-218ENST00000490032 NXPH1P58417 271 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 TXNRD1Q16881 649 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 PREPLQ4J6C6 727 aaPredicted RBP5□□□□□ -1.61
HMGN1-218ENST00000490032 TSHZ1Q6ZSZ6 1077 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 FAM90A1Q86YD7 464 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 ZNF384Q8TF68 577 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 TFAP2BQ92481 460 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 FRMD4BQ9Y2L6 1034 aa5□□□□□ -1.61
HMGN1-218ENST00000490032 ZBTB32Q9Y2Y4 487 aaPredicted RBP5□□□□□ -1.61
HMGN1-218ENST00000490032 LRRC14BA6NHZ5 514 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 POLRMTO00411 1230 aaKnown RBP4.99□□□□□ -1.61
HMGN1-218ENST00000490032 GNAI3P08754 354 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 ELFN1P0C7U0 828 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 PDCP20941 246 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 SMARCA1P28370 1054 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 PIK3CGP48736 1102 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 HK3P52790 923 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 GNAI1P63096 354 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 ITIH3Q06033 890 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 HABP2Q14520 560 aaPredicted RBP4.99□□□□□ -1.61
HMGN1-218ENST00000490032 KIF22Q14807 665 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 THEMIS2Q5TEJ8 643 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 FAM9AQ8IZU1 332 aaPredicted RBP4.99□□□□□ -1.61
HMGN1-218ENST00000490032 TOR1AIP2Q8NFQ8 470 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 SARAFQ96BY9 339 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 OSBPL9Q96SU4 736 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 SMAD5Q99717 465 aaKnown RBP4.99□□□□□ -1.61
HMGN1-218ENST00000490032 WDCPQ9H6R7 721 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 IL17RBQ9NRM6 502 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 ASB6Q9NWX5 421 aa4.99□□□□□ -1.61
HMGN1-218ENST00000490032 A0A0B4J269 797 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms