RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 CCDC62Q6P9F0 684 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 ANKRD23Q86SG2 305 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 RASAL3Q86YV0 1011 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 CENPTQ96BT3 561 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 TLCD1Q96CP7 247 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 SNF8Q96H20 258 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 ANKRD36BP1Q96IX9 119 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 C11orf70Q9BRQ4 267 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 FOXP3Q9BZS1 431 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 SLC12A6Q9UHW9 1150 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 UMODL1Q5DID0 1318 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 ZBTB42B2RXF5 422 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 ABLIM1O14639 778 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
COL9A1-208ENST00000489611 MED7O43513 233 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 FAM107AO95990 144 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 TMEM191BP0C7N4 346 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 HSDL1Q3SXM5 330 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 ZNF484Q5JVG2 852 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 RCOR2Q8IZ40 523 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 CCDC89Q8N998 374 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 OR2W6PQ8NHA6 318 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 EFCC1Q9HA90 598 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 PTPRHQ9HD43 1115 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 ERAP1Q9NZ08 941 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 TNFSF13BQ9Y275 285 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 SLC45A1Q9Y2W3 748 aa15.88■□□□□ 0.13
COL9A1-208ENST00000489611 MYO1CO00159 1063 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 MAGEB2O15479 319 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 AGTP01019 485 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 EDN1P05305 212 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 PGK2P07205 417 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 SRGAP2CP0DJJ0 459 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 POLR2BP30876 1174 aaKnown RBP15.87■□□□□ 0.13
COL9A1-208ENST00000489611 TNFAIP2Q03169 654 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 KRT17Q04695 432 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 KLF1Q13351 362 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-208ENST00000489611 PIGHQ14442 188 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-208ENST00000489611 FAM187BQ17R55 369 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 ATF7IP2Q5U623 682 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 FGD4Q96M96 766 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 TRAIPQ9BWF2 469 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 DCLK3Q9C098 648 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 CISHQ9NSE2 258 aa15.87■□□□□ 0.13
COL9A1-208ENST00000489611 PRMT7Q9NVM4 692 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-208ENST00000489611 NOVA2Q9UNW9 492 aaKnown RBP15.87■□□□□ 0.13
COL9A1-208ENST00000489611 TCRBV7S2A1N4TA0A589 114 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 ARIH2O95376 493 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 TXNP10599 105 aaKnown RBP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 HPDP32754 393 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 PTPN7P35236 360 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 CCT5P48643 541 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 GUCY1A3Q02108 690 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 MKRN4PQ13434 485 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 ZNF699Q32M78 642 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 RGMBQ6NW40 437 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 DRICH1Q6PGQ1 229 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 MMS22LQ6ZRQ5 1243 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 MTMR12Q9C0I1 747 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 EPB41L4BQ9H329 900 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 DDX56Q9NY93 547 aaKnown RBP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 BCCIPQ9P287 314 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 PTPN22Q9Y2R2 807 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 ZSWIM8A7E2V4 1837 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 COL1A2P08123 1366 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 TMEM191CA6NGB0 347 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 CST3P01034 146 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 HARSP12081 509 aaKnown RBP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 ATP5DP30049 168 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 TNFSF9P41273 254 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 PHKA2P46019 1235 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 CORO7P57737 925 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 CCNA1P78396 465 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 DRP2Q13474 957 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 LAMC2Q13753 1193 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 ZNF568Q3ZCX4 644 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 EEPD1Q7L9B9 569 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 YTHDF3Q7Z739 585 aaKnown RBP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 ZBTB33Q86T24 672 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 IFNLR1Q8IU57 520 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-208ENST00000489611 RHPN2Q8IUC4 686 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 CCDC50Q8IVM0 306 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 NIPA2Q8N8Q9 360 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 GPRC5AQ8NFJ5 357 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 OSBPL8Q9BZF1 889 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 LHX5Q9H2C1 402 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 ASIC3Q9UHC3 531 aa15.86■□□□□ 0.13
COL9A1-208ENST00000489611 FAM170AA1A519 330 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 RGS16O15492 202 aaPredicted RBP15.85■□□□□ 0.13
COL9A1-208ENST00000489611 RIPK2O43353 540 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 HOXC6P09630 235 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 MYL6P60660 151 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 MAGOHP61326 146 aaKnown RBP15.85■□□□□ 0.13
COL9A1-208ENST00000489611 SLC29A2Q14542 456 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 MFSD5Q6N075 450 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 FOXR1Q6PIV2 292 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 TAOK1Q7L7X3 1001 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 TTC39CQ8N584 583 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 SCLT1Q96NL6 688 aa15.85■□□□□ 0.13
COL9A1-208ENST00000489611 WDR35Q9P2L0 1181 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms