RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 POTEHQ6S545 545 aa12.96□□□□□ -0.33
SFXN3-207ENST00000489434 HAUS6Q7Z4H7 955 aa12.96□□□□□ -0.33
SFXN3-207ENST00000489434 ITIH5Q86UX2 942 aa12.96□□□□□ -0.33
SFXN3-207ENST00000489434 ZNF687Q8N1G0 1237 aa12.96□□□□□ -0.33
SFXN3-207ENST00000489434 SHKBP1Q8TBC3 707 aa12.96□□□□□ -0.33
SFXN3-207ENST00000489434 PGLYRP2Q96PD5 576 aa12.96□□□□□ -0.33
SFXN3-207ENST00000489434 PLIN2Q99541 437 aa12.96□□□□□ -0.33
SFXN3-207ENST00000489434 C8orf33Q9H7E9 229 aaPredicted RBP12.96□□□□□ -0.33
SFXN3-207ENST00000489434 RPF1Q9H9Y2 349 aaKnown RBP12.96□□□□□ -0.33
SFXN3-207ENST00000489434 ODF2LQ9ULJ1 636 aa12.96□□□□□ -0.33
SFXN3-207ENST00000489434 TIMM13Q9Y5L4 95 aaPredicted RBP12.96□□□□□ -0.33
SFXN3-207ENST00000489434 A0A1W2PRU2 124 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 OGTO15294 1046 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 CHADO15335 359 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 MOSPD3O75425 235 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 KRT18P05783 430 aaKnown RBP12.95□□□□□ -0.34
SFXN3-207ENST00000489434 TYMPP19971 482 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 CCNE1P24864 410 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 UBA7P41226 1012 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
SFXN3-207ENST00000489434 SLC12A3P55017 1021 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 ZBTB6Q15916 424 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 LAIR1Q6GTX8 287 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 CD302Q8IX05 232 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 SPEM1Q8N4L4 309 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 RASSF8Q8NHQ8 419 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 CALML4Q96GE6 196 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 AK8Q96MA6 479 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 PNMA5Q96PV4 448 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 MSTO1Q9BUK6 570 aa12.95□□□□□ -0.34
SFXN3-207ENST00000489434 SHISA7A6NL88 538 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 FAM13AO94988 1023 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 OR4Q2P0C623 313 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 NCKAP1LP55160 1127 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 LILRA4P59901 499 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 FCHO2Q0JRZ9 810 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 VEPH1Q14D04 833 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 ENOX2Q16206 610 aaKnown RBP12.94□□□□□ -0.34
SFXN3-207ENST00000489434 TAF12Q16514 161 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 DGKKQ5KSL6 1271 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 CENPPQ6IPU0 288 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 PRR23BQ6ZRT6 265 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 GPBP1Q86WP2 473 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 RALGPS2Q86X27 583 aaPredicted RBP12.94□□□□□ -0.34
SFXN3-207ENST00000489434 ARID3BQ8IVW6 561 aaPredicted RBP12.94□□□□□ -0.34
SFXN3-207ENST00000489434 MYCT1Q8N699 235 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 GCNAQ96QF7 691 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 PARVGQ9HBI0 331 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 HSFX1Q9UBD0 423 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 DSEQ9UL01 958 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 TBX20Q9UMR3 447 aa12.94□□□□□ -0.34
SFXN3-207ENST00000489434 RALGAPA1Q6GYQ0 2036 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 NPHP3-ACAD11A0A0J9YXS1 232 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 SLC38A8A6NNN8 435 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 K7ENM7 598 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 LRP3O75074 770 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 TBCAO75347 108 aaKnown RBP12.93□□□□□ -0.34
SFXN3-207ENST00000489434 CHRNB1P11230 501 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 TDGF1P13385 188 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 CNR2P34972 360 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 TNFSF9P41273 254 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 TUFMP49411 452 aaKnown RBP12.93□□□□□ -0.34
SFXN3-207ENST00000489434 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 SIM2Q14190 667 aaPredicted RBP12.93□□□□□ -0.34
SFXN3-207ENST00000489434 TMEM132DQ14C87 1099 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 TMEM119Q4V9L6 283 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 ARHGAP29Q52LW3 1261 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 SPATA1Q5VX52 437 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 DNAJB7Q7Z6W7 309 aaPredicted RBP12.93□□□□□ -0.34
SFXN3-207ENST00000489434 METTL23Q86XA0 190 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 ATAD1Q8NBU5 361 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 KCNN1Q92952 543 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 PSMG2Q969U7 264 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 SENP8Q96LD8 212 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 REEP2Q9BRK0 252 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 RTKNQ9BST9 563 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 LRRC3Q9BY71 257 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 ZHX3Q9H4I2 956 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 THG1LQ9NWX6 298 aaKnown RBP12.93□□□□□ -0.34
SFXN3-207ENST00000489434 ZMYM5Q9UJ78 669 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 SLC27A5Q9Y2P5 690 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 DERAQ9Y315 318 aa12.93□□□□□ -0.34
SFXN3-207ENST00000489434 A0A0B4J269 797 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 MTMR11A4FU01 709 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 SPECC1L-ADORA2AF8WAN1 911 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 ARNTLO00327 626 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 NRG2O14511 850 aaPredicted RBP12.92□□□□□ -0.34
SFXN3-207ENST00000489434 FOXD2O60548 495 aaPredicted RBP12.92□□□□□ -0.34
SFXN3-207ENST00000489434 VNN2O95498 520 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 BMP15O95972 392 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 PIGRP01833 764 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 RETP07949 1114 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 GABRR2P28476 465 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 CDC25CP30307 473 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 GUCY2FP51841 1108 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 ATXN1P54253 815 aaKnown RBP12.92□□□□□ -0.34
SFXN3-207ENST00000489434 SATB1Q01826 763 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms