RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CCL16O15467 120 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 SMC2O95347 1197 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 DLATP10515 647 aaKnown RBP15.4■□□□□ 0.06
BRCA1-218ENST00000489037 ATF2P15336 505 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 GBP2P32456 591 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-218ENST00000489037 BFSP1Q12934 665 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 MYO1EQ12965 1108 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 WDR49Q8IV35 697 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 ZDHHC14Q8IZN3 488 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 FMR1NBQ8N0W7 255 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-218ENST00000489037 ELMOD1Q8N336 334 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 LRRC52Q8N7C0 313 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 ZNF707Q96C28 371 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-218ENST00000489037 MTMR12Q9C0I1 747 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 INTS13Q9NVM9 706 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 C5orf42Q9H799 3197 aa15.4■□□□□ 0.06
BRCA1-218ENST00000489037 SPTLC1O15269 473 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 HUS1O60921 280 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 PAPLNO95428 1278 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 CYP11A1P05108 521 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 POU2F2P09086 479 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 WNT7BP56706 349 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 CYP24A1Q07973 514 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 ADCY1Q08828 1119 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 MYBPC2Q14324 1141 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 PSMD6Q15008 389 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 GRASPQ7Z6J2 395 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-218ENST00000489037 TCEAL8Q8IYN2 117 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 C1orf127Q8N9H9 656 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 KHSRPQ92945 711 aaKnown RBP eCLIP15.39■□□□□ 0.05
BRCA1-218ENST00000489037 CCDC127Q96BQ5 260 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 TIGD1Q96MW7 591 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 GTPBP4Q9BZE4 634 aaKnown RBP15.39■□□□□ 0.05
BRCA1-218ENST00000489037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.39■□□□□ 0.057e-7■□□□□ 9.9
BRCA1-218ENST00000489037 FRMD4BQ9Y2L6 1034 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 DOCK8Q8NF50 2099 aa15.39■□□□□ 0.05
BRCA1-218ENST00000489037 KINO60870 393 aaKnown RBP15.38■□□□□ 0.05
BRCA1-218ENST00000489037 FSHRP23945 695 aa15.38■□□□□ 0.05
BRCA1-218ENST00000489037 TMEM31Q5JXX7 168 aa15.38■□□□□ 0.05
BRCA1-218ENST00000489037 LMBRD2Q68DH5 695 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-218ENST00000489037 SLC9A9Q8IVB4 645 aa15.38■□□□□ 0.05
BRCA1-218ENST00000489037 CGRRF1Q99675 332 aa15.38■□□□□ 0.05
BRCA1-218ENST00000489037 KCTD10Q9H3F6 313 aa15.38■□□□□ 0.05
BRCA1-218ENST00000489037 LIMD1Q9UGP4 676 aa15.38■□□□□ 0.05
BRCA1-218ENST00000489037 PHACTR2O75167 634 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 NR3C1P04150 777 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 PTPN2P17706 415 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 RPL13P26373 211 aaKnown RBP15.37■□□□□ 0.05
BRCA1-218ENST00000489037 AP3M2P53677 418 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 GPR17Q13304 367 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 PLD1Q13393 1074 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 TRPC3Q13507 836 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 PNOCQ13519 176 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 SNW1Q13573 536 aaKnown RBP15.37■□□□□ 0.05
BRCA1-218ENST00000489037 PTPN21Q16825 1174 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 WSCD1Q658N2 575 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 IQCEQ6IPM2 695 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 RNF19BQ6ZMZ0 732 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 GET4Q7L5D6 327 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-218ENST00000489037 TMEM86AQ8N2M4 240 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 GUF1Q8N442 669 aaKnown RBP15.37■□□□□ 0.05
BRCA1-218ENST00000489037 ENGASEQ8NFI3 743 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 OR5B17Q8NGF7 314 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 FEZF2Q8TBJ5 459 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 EDAQ92838 391 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 SMARCE1Q969G3 411 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 MFSD14AQ96MC6 490 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 ZNF512Q96ME7 567 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-218ENST00000489037 GSDMAQ96QA5 445 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 INSL5Q9Y5Q6 135 aa15.37■□□□□ 0.05
BRCA1-218ENST00000489037 ZFP37Q9Y6Q3 630 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-218ENST00000489037 TSC2P49815 1807 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 GPR37L1O60883 481 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 CLSTN1O94985 981 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 SEC24AO95486 1093 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 OR4Q2P0C623 313 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 MYL7Q01449 175 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 TSPY1Q01534 308 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 SMARCB1Q12824 385 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 MTMR3Q13615 1198 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 PABPC1LQ4VXU2 614 aaKnown RBP15.36■□□□□ 0.05
BRCA1-218ENST00000489037 CEP135Q66GS9 1140 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 TRAPPC11Q7Z392 1133 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 DCP1BQ8IZD4 617 aaKnown RBP15.36■□□□□ 0.05
BRCA1-218ENST00000489037 TMEM174Q8WUU8 243 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 BORCS6Q96GS4 357 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 HPDLQ96IR7 371 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 PGLYRP2Q96PD5 576 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 DMAC2Q9NW81 257 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 GDAP2Q9NXN4 497 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 IGSF9Q9P2J2 1179 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 SORCS3Q9UPU3 1222 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 TRAF3IP3Q9Y228 551 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 SNX9Q9Y5X1 595 aa15.36■□□□□ 0.05
BRCA1-218ENST00000489037 ZNF197O14709 1029 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 ALDH1A3P47895 512 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 LHX1P48742 406 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 EPHB3P54753 998 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 ZXDAP98168 799 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms