RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SUPT20HL1Q3ZLR7 823 aa3.87□□□□□ -1.79
CCDC93-209ENST00000488908 DALRD3Q5D0E6 543 aaKnown RBP3.87□□□□□ -1.79
CCDC93-209ENST00000488908 UTP14CQ5TAP6 766 aaKnown RBP3.87□□□□□ -1.79
CCDC93-209ENST00000488908 CEP85Q6P2H3 762 aa3.87□□□□□ -1.79
CCDC93-209ENST00000488908 QTRT1Q9BXR0 403 aaKnown RBP3.87□□□□□ -1.79
CCDC93-209ENST00000488908 VSX1Q9NZR4 365 aaPredicted RBP3.87□□□□□ -1.79
CCDC93-209ENST00000488908 APOBEC2Q9Y235 224 aaKnown RBP3.87□□□□□ -1.79
CCDC93-209ENST00000488908 E7ENX8 843 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 PDE8AO60658 829 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 JTBO76095 146 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 TUBB4AP04350 444 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 MTHFD1P11586 935 aaKnown RBP3.86□□□□□ -1.79
CCDC93-209ENST00000488908 SLC6A4P31645 630 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 ID4P47928 161 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 SRSF2Q01130 221 aaKnown RBP3.86□□□□□ -1.79
CCDC93-209ENST00000488908 MC2RQ01718 297 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 TAP2Q03519 686 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 ZNF260Q3ZCT1 412 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 CEP78Q5JTW2 689 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 CMIPQ8IY22 773 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 SAMD14Q8IZD0 417 aaPredicted RBP3.86□□□□□ -1.79
CCDC93-209ENST00000488908 RFKQ969G6 155 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 C7orf25Q9BPX7 421 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 SH2D3AQ9BRG2 576 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 TUBA8Q9NY65 449 aaPredicted RBP3.86□□□□□ -1.79
CCDC93-209ENST00000488908 EHD3Q9NZN3 535 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 SH3BP4Q9P0V3 963 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 MAPRE3Q9UPY8 281 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 DNM3Q9UQ16 869 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 PCDHGA2Q9Y5H1 932 aa3.86□□□□□ -1.79
CCDC93-209ENST00000488908 GRM6O15303 877 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 CDC45O75419 566 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 RHOP08100 348 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 ZFXP17010 805 aaPredicted RBP3.85□□□□□ -1.79
CCDC93-209ENST00000488908 NR4A2P43354 598 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 NPTX2P47972 431 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 SCAND1P57086 179 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 PABPC1LQ4VXU2 614 aaKnown RBP3.85□□□□□ -1.79
CCDC93-209ENST00000488908 PRAMEF17Q5VTA0 474 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 SLC2A7Q6PXP3 512 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 TMPRSS9Q7Z410 1059 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 CFAP52Q8N1V2 620 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 DCBLD1Q8N8Z6 715 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 NSUN7Q8NE18 718 aaKnown RBP3.85□□□□□ -1.79
CCDC93-209ENST00000488908 OR2I1PQ8NGU4 316 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 KLHL32Q96NJ5 620 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 VPS16Q9H269 839 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 SERTAD4Q9NUC0 356 aa3.85□□□□□ -1.79
CCDC93-209ENST00000488908 A0A087X0B3 334 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 A0A0B4J269 797 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 NDUFB7P17568 137 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 POU6F2P78424 691 aaPredicted RBP3.84□□□□□ -1.79
CCDC93-209ENST00000488908 TUBB3Q13509 450 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 BMPR2Q13873 1038 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 CCDC144BQ3MJ40 725 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 SLC29A4Q7RTT9 530 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 ZNF551Q7Z340 670 aaPredicted RBP3.84□□□□□ -1.79
CCDC93-209ENST00000488908 KRT73Q86Y46 540 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 ZDHHC17Q8IUH5 632 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 RHOT1Q8IXI2 618 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 FKBP10Q96AY3 582 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 TMEM79Q9BSE2 394 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 PACSIN1Q9BY11 444 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 TPSD1Q9BZJ3 242 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 IMPG2Q9BZV3 1241 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 PRSS22Q9GZN4 317 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 SPRTNQ9H040 489 aaPredicted RBP3.84□□□□□ -1.79
CCDC93-209ENST00000488908 DNAJC28Q9NX36 388 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 WWOXQ9NZC7 414 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 JKAMPQ9P055 326 aa3.84□□□□□ -1.79
CCDC93-209ENST00000488908 MYMKA6NI61 221 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 TISP43B9A030 160 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 F5H697 171 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 TRIAP1O43715 76 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 FAM163BP0C2L3 166 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 MYCLP1P12525 358 aaPredicted RBP3.83□□□□□ -1.8
CCDC93-209ENST00000488908 PXDC1Q5TGL8 231 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 TAPT1Q6NXT6 567 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 ZNF365Q70YC5 407 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 DDX46Q7L014 1031 aaKnown RBP3.83□□□□□ -1.8
CCDC93-209ENST00000488908 ZNF804AQ7Z570 1209 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 FAM9AQ8IZU1 332 aaPredicted RBP3.83□□□□□ -1.8
CCDC93-209ENST00000488908 AOPEPQ8N6M6 819 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 FANCBQ8NB91 859 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 IL17RDQ8NFM7 739 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 TBC1D5Q92609 795 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 REPS1Q96D71 796 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 TRIB1Q96RU8 372 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 SMOQ99835 787 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 EBF3Q9H4W6 596 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 LRP12Q9Y561 859 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.83□□□□□ -1.8
CCDC93-209ENST00000488908 SPATA31A3Q5VYP0 1347 aa3.83□□□□□ -1.8
CCDC93-209ENST00000488908 KCNU1A8MYU2 1149 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 PRRT4C9JH25 899 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 SMIM22K7EJ46 135 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 MYO1FO00160 1098 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 NXPH3O95157 252 aa3.82□□□□□ -1.8
CCDC93-209ENST00000488908 SBK3P0C264 359 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms