RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 CYFIP2Q96F07 1278 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 HPDLQ96IR7 371 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 DEFB118Q96PH6 123 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 RPS6KC1Q96S38 1066 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 GOLPH3Q9H4A6 298 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 CNOT8Q9UFF9 292 aaKnown RBP21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 AGAP1Q9UPQ3 857 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 LSM8O95777 96 aaKnown RBP21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 CALCAP01258 141 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 POLR2BP30876 1174 aaKnown RBP21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 NOMO3P69849 1222 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 LIN9Q5TKA1 542 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 NAA35Q5VZE5 725 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 RPAINQ86UA6 219 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 ZNF564Q8TBZ8 553 aaPredicted RBP21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 NUP85Q9BW27 656 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 ZNF518BQ9C0D4 1074 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 RNF208Q9H0X6 261 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 ANKZF1Q9H8Y5 726 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 PHF24Q9UPV7 400 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 TRPV2Q9Y5S1 764 aa21.48■■□□□ 1.03
ATP1A1-208ENST00000488733 MIF4GDA9UHW6 222 aaKnown RBP21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 PAEPP09466 180 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 DNA2P51530 1060 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 ZBTB6Q15916 424 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 ALKAL1Q6UXT8 129 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 SCARA5Q6ZMJ2 495 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 PHF13Q86YI8 300 aaPredicted RBP21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 BEST2Q8NFU1 509 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 CPA5Q8WXQ8 436 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 WNT8BQ93098 351 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 STARD7Q9NQZ5 370 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 CNTN3Q9P232 1028 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 POLIQ9UNA4 740 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 ALG6Q9Y672 507 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 RALGAPA2Q2PPJ7 1873 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 BRCA2P51587 3418 aa21.47■■□□□ 1.03
ATP1A1-208ENST00000488733 DNM1LO00429 736 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 MCM3P25205 808 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 MYO1EQ12965 1108 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 BRD3Q15059 726 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 ACTRT1Q8TDG2 376 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 EPC1Q9H2F5 836 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 TRMT13Q9NUP7 481 aaKnown RBP21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 RAB21Q9UL25 225 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 PCDHGC3Q9UN70 934 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 NOD1Q9Y239 953 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 TARSL2A2RTX5 802 aaKnown RBP21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 MED7O43513 233 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 RHOXF2BP0C7M4 288 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 C1QBPQ07021 282 aaKnown RBP21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 MON1BQ7L1V2 547 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 RHOXF2Q9BQY4 288 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 CDY2AQ9Y6F7 541 aa21.46■■□□□ 1.03
ATP1A1-208ENST00000488733 A0A0U1RQG5 324 aaPredicted RBP21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 XPOTO43592 962 aaKnown RBP21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 RECQL4O94761 1208 aa21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 TNNC1P63316 161 aa21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 CLUL1Q15846 466 aa21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 UBXN11Q5T124 520 aa21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 FBXO46Q6PJ61 603 aaPredicted RBP21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 TMEM35BQ8NCS4 154 aa21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 MS4A14Q96JA4 679 aa21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 NXF3Q9H4D5 531 aaKnown RBP21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 MRPL47Q9HD33 250 aaKnown RBP21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 ADAM22Q9P0K1 906 aa21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 OGDHLQ9ULD0 1010 aa21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 UBQLN1Q9UMX0 589 aaKnown RBP21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 CEP83Q9Y592 693 aa21.45■■□□□ 1.02
ATP1A1-208ENST00000488733 CCDC151A5D8V7 595 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 ATMINO43313 823 aaPredicted RBP21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 CEP104O60308 925 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 CTSHP09668 335 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 LBX1P52954 281 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 C2orf54Q08AI8 447 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 PTK7Q13308 1070 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 MESDQ14696 234 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 ZNF394Q53GI3 561 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 XKR4Q5GH76 650 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 FAM228AQ86W67 206 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 RASGEF1CQ8N431 466 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 LRRC52Q8N7C0 313 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 UBL4BQ8N7F7 174 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 SLC43A3Q8NBI5 491 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 WNT8AQ9H1J5 351 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 CARD9Q9H257 536 aa21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 NOC2LQ9Y3T9 749 aaKnown RBP21.44■■□□□ 1.02
ATP1A1-208ENST00000488733 FAM170AA1A519 330 aa21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 TLR3O15455 904 aaKnown RBP21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 DDX3YO15523 660 aaKnown RBP21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 CILPO75339 1184 aa21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 CD4P01730 458 aa21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 CFHP08603 1231 aa21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 KCNE1P15382 129 aa21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 BRD2P25440 801 aaKnown RBP21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 CDH5P33151 784 aaPredicted RBP21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 THPOP40225 353 aa21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 CLCN6P51797 869 aa21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 WDR93Q6P2C0 686 aa21.43■■□□□ 1.02
ATP1A1-208ENST00000488733 TMCO3Q6UWJ1 677 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms