RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 PPP1R13LQ8WUF5 828 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 RUNDC3BQ96NL0 473 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 RAB6CQ9H0N0 254 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 ZNF302Q9NR11 478 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 STYXL1Q9Y6J8 313 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
CLIC4-202ENST00000488683 BRAFP15056 766 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 PTK6Q13882 451 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 XKR3Q5GH77 459 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 TMEM121Q9BTD3 319 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 ZWILCHQ9H900 591 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 PICK1Q9NRD5 415 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.44□□□□□ -0.263e-7■■□□□ 14
CLIC4-202ENST00000488683 NEU2Q9Y3R4 380 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 RASSF9O75901 435 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 CDH8P55286 799 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 PTP4A2Q12974 167 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 NCOA4Q13772 614 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 CAPSQ13938 189 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 HIBCHQ6NVY1 386 aaPredicted RBP13.44□□□□□ -0.26
CLIC4-202ENST00000488683 CYB5D1Q6P9G0 228 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 ZNF365Q70YC5 407 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 THNSL1Q8IYQ7 743 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 FUKQ8N0W3 1084 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 ANKRD35Q8N283 1001 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 EMC1Q8N766 993 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 ZNF606Q8WXB4 792 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 TFAP2BQ92481 460 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 PCYT2Q99447 389 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 RNF19AQ9NV58 838 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 PIM2Q9P1W9 311 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 NXF1Q9UBU9 619 aaKnown RBP13.44□□□□□ -0.26
CLIC4-202ENST00000488683 POLIQ9UNA4 740 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 NAALADL1Q9UQQ1 740 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 CNTNAP2Q9UHC6 1331 aa13.44□□□□□ -0.26
CLIC4-202ENST00000488683 CCT8L1PA6NM43 557 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 B4GALT5O43286 388 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 UBOX5O94941 541 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 TTC4O95801 387 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 PGK2P07205 417 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 CLTAP09496 248 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 KCNJ2P63252 427 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 EFTUD2Q15029 972 aaKnown RBP eCLIP13.43□□□□□ -0.263e-6■■■■□ 23.5
CLIC4-202ENST00000488683 MFSD5Q6N075 450 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 TRMT10CQ7L0Y3 403 aaKnown RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 ZNF677Q86XU0 584 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 ABRAQ8N0Z2 381 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 C4orf33Q8N1A6 199 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 GPATCH11Q8N954 259 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 PRCCQ92733 491 aaPredicted RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 PLVAPQ9BX97 442 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 PORCNQ9H237 461 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 DHX33Q9H6R0 707 aaKnown RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 ACAD9Q9H845 621 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 SAYSD1Q9NPB0 183 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 GINM1Q9NU53 330 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 ZNF148Q9UQR1 794 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 POLR2AP24928 1970 aaKnown RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 MAP3K6O95382 1288 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 KRT1P04264 644 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 MYBL1P10243 752 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 ITIH2P19823 946 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 SLC1A1P43005 524 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 TFAMQ00059 246 aaKnown RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 TAF5Q15542 800 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 POTEAQ6S8J7 498 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 PNMA8AQ86V59 439 aaPredicted RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 SUGP1Q8IWZ8 645 aaKnown RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 KIRREL3Q8IZU9 778 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 PRPF31Q8WWY3 499 aaKnown RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 TEX13BQ9BXU2 312 aa13.43□□□□□ -0.26
CLIC4-202ENST00000488683 TPX2Q9ULW0 747 aaKnown RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 MAFBQ9Y5Q3 323 aaPredicted RBP13.43□□□□□ -0.26
CLIC4-202ENST00000488683 SPDYE16A6NNV3 312 aaPredicted RBP13.42□□□□□ -0.26
CLIC4-202ENST00000488683 DKC1O60832 514 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLIC4-202ENST00000488683 OATP04181 439 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 CD48P09326 243 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 CGB2Q6NT52 195 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 ARMC9Q7Z3E5 817 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 PIGWQ7Z7B1 504 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 RMDN2Q96LZ7 410 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.264e-6■□□□□ 8.6
CLIC4-202ENST00000488683 KLF6Q99612 283 aaPredicted RBP13.42□□□□□ -0.26
CLIC4-202ENST00000488683 ZNF112Q9UJU3 913 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.42□□□□□ -0.26
CLIC4-202ENST00000488683 MGAMO43451 1857 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 ADGRA2Q96PE1 1338 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 ARL2P36404 184 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 OAZ1P54368 228 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 GDF10P55107 478 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 ENPEPQ07075 957 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 GPS1Q13098 491 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 CATSPERGQ6ZRH7 1159 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 ATL2Q8NHH9 583 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 COPS5Q92905 334 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 FAM81BQ96LP2 452 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 SAMD15Q9P1V8 674 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 PCSK1NQ9UHG2 260 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms