RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 CST3P01034 146 aaPredicted RBP13.61□□□□□ -0.23
NELFE-209ENST00000488426 CA3P07451 260 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 NFICP08651 508 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 WDR5P61964 334 aaKnown RBP13.61□□□□□ -0.23
NELFE-209ENST00000488426 JADE1Q6IE81 842 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 SPOPLQ6IQ16 392 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 NOX5Q96PH1 765 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 NIF3L1Q9GZT8 377 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 MSRAQ9UJ68 235 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 CNTN6Q9UQ52 1028 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 DERAQ9Y315 318 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 NUB1Q9Y5A7 615 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 A0A0A6YYK5 440 aaPredicted RBP13.61□□□□□ -0.23
NELFE-209ENST00000488426 EPOPA6NHQ4 379 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 CHRNA1P02708 482 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 KRT5P13647 590 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 FOSL2P15408 326 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 CYP11B1P15538 503 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 ACO1P21399 889 aaKnown RBP13.61□□□□□ -0.23
NELFE-209ENST00000488426 MYL6P60660 151 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 CDR2Q01850 454 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 TMEM132DQ14C87 1099 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 ZNF699Q32M78 642 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 NOP9Q86U38 636 aaKnown RBP13.61□□□□□ -0.23
NELFE-209ENST00000488426 SLC47A2Q86VL8 602 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 ZNF677Q86XU0 584 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 HERC6Q8IVU3 1022 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 SLC20A1Q8WUM9 679 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 ARID3AQ99856 593 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 PACSIN1Q9BY11 444 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 MTIF3Q9H2K0 278 aaKnown RBP13.61□□□□□ -0.23
NELFE-209ENST00000488426 PIN4Q9Y237 131 aaKnown RBP13.61□□□□□ -0.23
NELFE-209ENST00000488426 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
NELFE-209ENST00000488426 CUL9Q8IWT3 2517 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 TMEM265A0A087WTH1 108 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 UQCRHLA0A096LP55 91 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 UQCRHP07919 91 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 ATICP31939 592 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 YARSP54577 528 aaKnown RBP13.6□□□□□ -0.23
NELFE-209ENST00000488426 IFI16Q16666 785 aaKnown RBP13.6□□□□□ -0.23
NELFE-209ENST00000488426 FAM117BQ6P1L5 589 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 C1orf127Q8N9H9 656 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 MAFAQ8NHW3 353 aaPredicted RBP13.6□□□□□ -0.23
NELFE-209ENST00000488426 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 TRIM6Q9C030 488 aaPredicted RBP13.6□□□□□ -0.23
NELFE-209ENST00000488426 XYLT2Q9H1B5 865 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 SLC28A3Q9HAS3 691 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 PRDM6Q9NQX0 595 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 ITGA11Q9UKX5 1188 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 PCDHA11Q9Y5I1 949 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 MRFAP1Q9Y605 127 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 CDY2AQ9Y6F7 541 aa13.6□□□□□ -0.23
NELFE-209ENST00000488426 PRRC2BQ5JSZ5 2229 aaKnown RBP13.6□□□□□ -0.23
NELFE-209ENST00000488426 PDCD11Q14690 1871 aaKnown RBP13.6□□□□□ -0.23
NELFE-209ENST00000488426 SLU7O95391 586 aaKnown RBP13.59□□□□□ -0.23
NELFE-209ENST00000488426 MOCS3O95396 460 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 TMEM253P0C7T8 217 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 GZMAP12544 262 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 CHRNB2P17787 502 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 YWHAEP62258 255 aaKnown RBP13.59□□□□□ -0.23
NELFE-209ENST00000488426 RAB30Q15771 203 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 CNKSR3Q6P9H4 555 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 UBR7Q8N806 425 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 DDX1Q92499 740 aaKnown RBP13.59□□□□□ -0.23
NELFE-209ENST00000488426 ELMO3Q96BJ8 720 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 SNX27Q96L92 541 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
NELFE-209ENST00000488426 ISCUQ9H1K1 167 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 VRTNQ9H8Y1 702 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 SEPT11Q9NVA2 429 aaKnown RBP13.59□□□□□ -0.23
NELFE-209ENST00000488426 SIX4Q9UIU6 781 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 SALL4Q9UJQ4 1053 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 JRKLQ9Y4A0 524 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 CAPN6Q9Y6Q1 641 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 NCANO14594 1321 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 CLSTN1O94985 981 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 STAU1O95793 577 aaKnown RBP13.59□□□□□ -0.23
NELFE-209ENST00000488426 GALCP54803 685 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 FMO1Q01740 532 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 PLEKHG4Q58EX7 1191 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 PPP2R2DQ66LE6 453 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 FAM228AQ86W67 206 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 PPM1EQ8WY54 764 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 CTNNBL1Q8WYA6 563 aaPredicted RBP13.59□□□□□ -0.23
NELFE-209ENST00000488426 SNTG2Q9NY99 539 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 CDC23Q9UJX2 597 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 PCDHB4Q9Y5E5 795 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
NELFE-209ENST00000488426 MYH10P35580 1976 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 ANKRD62A6NC57 917 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 CTIFO43310 598 aaKnown RBP13.58□□□□□ -0.24
NELFE-209ENST00000488426 RTN2O75298 545 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 BAIAP3O94812 1187 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 ITGB3P05106 788 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 MMEP08473 750 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 KRT19P08727 400 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 AMPD2Q01433 879 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 TAP1Q03518 808 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 MGAT3Q09327 533 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 UBXN11Q5T124 520 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms