RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 OR10T2Q8NGX3 314 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 SLC35C1Q96A29 364 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 CEP63Q96MT8 703 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 SDCBP2Q9H190 292 aa18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 UBE2ZQ9H832 354 aaPredicted RBP18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 APOBEC3GQ9HC16 384 aaKnown RBP18.45■□□□□ 0.54
SHROOM1-205ENST00000488072 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 SYN3O14994 580 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 TGM5O43548 720 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 VNN2O95498 520 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 WEE2P0C1S8 567 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 ACAT1P24752 427 aaKnown RBP18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 CLCN4P51793 760 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 CDH8P55286 799 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 MCCD1P59942 119 aaPredicted RBP18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 TRPC3Q13507 836 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 SOWAHAQ2M3V2 549 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 SV2CQ496J9 727 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 CTXN3Q4LDR2 81 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 SCARA5Q6ZMJ2 495 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 LRRC52Q8N7C0 313 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 MRPL45Q9BRJ2 306 aaKnown RBP18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 FUCA2Q9BTY2 467 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 EMILIN2Q9BXX0 1053 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 SMYD3Q9H7B4 428 aa18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 NXF1Q9UBU9 619 aaKnown RBP18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 ARMCX3Q9UH62 379 aaPredicted RBP18.44■□□□□ 0.54
SHROOM1-205ENST00000488072 RFPL2O75678 378 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 ODC1P11926 461 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 LMO2P25791 158 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 NDUFV1P49821 464 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 ROR1Q01973 937 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 STX1AQ16623 288 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 OVOS1Q6IE37 1185 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 LILRA6Q6PI73 481 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 SYCE2Q6PIF2 218 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 FRMD5Q7Z6J6 570 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 LRRTM3Q86VH5 581 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 KBTBD7Q8WVZ9 684 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 PABPC5Q96DU9 382 aaKnown RBP18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 CNOT6LQ96LI5 555 aaKnown RBP18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 ZNF560Q96MR9 790 aa18.43■□□□□ 0.54
SHROOM1-205ENST00000488072 WDR27A2RRH5 827 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 IKBKBO14920 756 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 CLSTN1O94985 981 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 TYMPP19971 482 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 ERCC5P28715 1186 aaPredicted RBP18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 PIK3CAP42336 1068 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 KCNQ1P51787 676 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 YWHAHQ04917 246 aaPredicted RBP18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 WDR72Q3MJ13 1102 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 ANO6Q4KMQ2 910 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 ANKS3Q6ZW76 656 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 TRIM59Q8IWR1 403 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 APPL2Q8NEU8 664 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 TATDN2Q93075 761 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 HLA-CQ95604 372 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 PGLYRP2Q96PD5 576 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 CRISPLD1Q9H336 500 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 TMEM8AQ9HCN3 771 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 MAN1C1Q9NR34 630 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 TMLHEQ9NVH6 421 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 GDAP2Q9NXN4 497 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 FNIP2Q9P278 1114 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 BACE2Q9Y5Z0 518 aa18.42■□□□□ 0.54
SHROOM1-205ENST00000488072 COL6A3P12111 3177 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 ATP2C2O75185 946 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 OAZ2O95190 189 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 SEC24AO95486 1093 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 CYP11A1P05108 521 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 MXI1P50539 228 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 LRMPQ12912 555 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 ORC1Q13415 861 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 BMS1Q14692 1282 aaKnown RBP18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 ZNF699Q32M78 642 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 FOXR2Q6PJQ5 311 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 RNF19BQ6ZMZ0 732 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 LIMS2Q7Z4I7 341 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 USP37Q86T82 979 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 TTC9BQ8N6N2 239 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 MSLNLQ96KJ4 702 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 MMS19Q96T76 1030 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 ANO10Q9NW15 660 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 BRWD1Q9NSI6 2320 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 PLXNA3P51805 1871 aa18.41■□□□□ 0.54
SHROOM1-205ENST00000488072 GRXCR2A6NFK2 248 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 GLUD1P00367 558 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 ADH1AP07327 375 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 PDGFRBP09619 1106 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 PNPLA4P41247 253 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 FMO5P49326 533 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 AP3M2P53677 418 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 APBA1Q02410 837 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 MYO1EQ12965 1108 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 RAB33AQ14088 237 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 NCAPHQ15003 741 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 TPD52L1Q16890 204 aaPredicted RBP18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 ZSCAN23Q3MJ62 389 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 RARS2Q5T160 578 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms