RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 M0QZQ0 153 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 CXCL14O95715 111 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 NOP14P78316 857 aaKnown RBP13.7□□□□□ -0.22
PRDM2-208ENST00000487453 DSG1Q02413 1049 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 YWHAHQ04917 246 aaPredicted RBP13.7□□□□□ -0.22
PRDM2-208ENST00000487453 IQCB1Q15051 598 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 PSMD5Q16401 504 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 SGSM1Q2NKQ1 1148 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
PRDM2-208ENST00000487453 SPOPLQ6IQ16 392 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 PDXDC1Q6P996 788 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 ANKS3Q6ZW76 656 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 METTL23Q86XA0 190 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 TAF4BQ92750 862 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 XYLT2Q9H1B5 865 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 NSUN3Q9H649 340 aaKnown RBP13.7□□□□□ -0.22
PRDM2-208ENST00000487453 CHST7Q9NS84 486 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 MTMR10Q9NXD2 777 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 DSEQ9UL01 958 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 POLIQ9UNA4 740 aa13.7□□□□□ -0.22
PRDM2-208ENST00000487453 FSCN2O14926 492 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 STAU1O95793 577 aaKnown RBP13.69□□□□□ -0.22
PRDM2-208ENST00000487453 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
PRDM2-208ENST00000487453 ATP1A3P13637 1013 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 P4HA1P13674 534 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 MCCD1P59942 119 aaPredicted RBP13.69□□□□□ -0.22
PRDM2-208ENST00000487453 CREMQ03060 361 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 KRT31Q15323 416 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 VWA3BQ502W6 1294 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 WDR44Q5JSH3 913 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 OVOS1Q6IE37 1185 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 ZNF280DQ6N043 979 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 ADGRD2Q7Z7M1 963 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 RBM23Q86U06 439 aaKnown RBP13.69□□□□□ -0.22
PRDM2-208ENST00000487453 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 MRPL43Q8N983 215 aaKnown RBP13.69□□□□□ -0.22
PRDM2-208ENST00000487453 RNF214Q8ND24 703 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 SEMA4DQ92854 862 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 PPP2R3CQ969Q6 453 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 EMILIN2Q9BXX0 1053 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 VPS16Q9H269 839 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 NDST4Q9H3R1 872 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 LMCD1Q9NZU5 365 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 GCNT4Q9P109 453 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 L1RE1Q9UN81 338 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
PRDM2-208ENST00000487453 C2orf71A6NGG8 1288 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 H7C4K7 107 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 P4HA2O15460 535 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 LRRN2O75325 713 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 ZNF18P17022 549 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 RPL17P18621 184 aaKnown RBP13.68□□□□□ -0.22
PRDM2-208ENST00000487453 TYMPP19971 482 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 RAP1GAPP47736 663 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 NRIP1P48552 1158 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 NDUFV1P49821 464 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 ARPP19P56211 112 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 LRMPQ12912 555 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 CTXN3Q4LDR2 81 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 MIIPQ5JXC2 388 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 KIAA0319Q5VV43 1072 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 WSCD1Q658N2 575 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 PDCL2Q8N4E4 241 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 TOP6BLQ8N6T0 577 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
PRDM2-208ENST00000487453 NIF3L1Q9GZT8 377 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
PRDM2-208ENST00000487453 HSD3B7Q9H2F3 369 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 SMYD3Q9H7B4 428 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 VRTNQ9H8Y1 702 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRDM2-208ENST00000487453 MTRRQ9UBK8 725 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 COQ4Q9Y3A0 265 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 CDY1Q9Y6F8 540 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
PRDM2-208ENST00000487453 PLXNA3P51805 1871 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 TRANK1O15050 2925 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 PER2O15055 1255 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 CYP11A1P05108 521 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 ADH1AP07327 375 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 CNPP09543 421 aaKnown RBP13.67□□□□□ -0.22
PRDM2-208ENST00000487453 CPB1P15086 417 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 KLRC2P26717 231 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 COPB1P53618 953 aaKnown RBP13.67□□□□□ -0.22
PRDM2-208ENST00000487453 SOWAHAQ2M3V2 549 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 TCEAL5Q5H9L2 206 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 FKBP15Q5T1M5 1219 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 THEM5Q8N1Q8 247 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 TMEM86AQ8N2M4 240 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 NT5C1BQ96P26 610 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 CRACR2AQ9BSW2 395 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 SNX25Q9H3E2 840 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 IGFLR1Q9H665 355 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 TLE6Q9H808 572 aa13.67□□□□□ -0.22
PRDM2-208ENST00000487453 APOBEC3GQ9HC16 384 aaKnown RBP13.67□□□□□ -0.22
PRDM2-208ENST00000487453 LIMA1Q9UHB6 759 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms