RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 TRAPPC3O43617 180 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 WISP1O95388 367 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 PSMC5P62195 406 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 GAREM2Q75VX8 874 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 MDGA1Q8NFP4 955 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 OR2I1PQ8NGU4 316 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 TCP11Q8WWU5 503 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 DNAJC25Q9H1X3 360 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 GKN1Q9NS71 199 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 FBXL5Q9UKA1 691 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 COL5A1P20908 1838 aaPredicted RBP12.89□□□□□ -0.35
TRIM56-204ENST00000487252 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
TRIM56-204ENST00000487252 CEP192Q8TEP8 1941 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 CCDC69A6NI79 296 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 I3L4J1 428 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 CFIP05156 583 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 ITPKAP23677 461 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 BRCC3P46736 316 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 CLCNKBP51801 687 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-204ENST00000487252 NAIF1Q69YI7 327 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-204ENST00000487252 KRT25Q7Z3Z0 450 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 NAXDQ8IW45 347 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 BEST2Q8NFU1 509 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 FCRL3Q96P31 734 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-204ENST00000487252 PPP1R10Q96QC0 940 aaKnown RBP12.88□□□□□ -0.35
TRIM56-204ENST00000487252 P2RY13Q9BPV8 354 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 POLR3CQ9BUI4 534 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-204ENST00000487252 ZMYND12Q9H0C1 365 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 OSBPL3Q9H4L5 887 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 THG1LQ9NWX6 298 aaKnown RBP12.88□□□□□ -0.35
TRIM56-204ENST00000487252 TOR4AQ9NXH8 423 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 PCDHB9Q9Y5E1 797 aa12.88□□□□□ -0.35
TRIM56-204ENST00000487252 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-204ENST00000487252 SPTAN1Q13813 2472 aaKnown RBP12.88□□□□□ -0.35
TRIM56-204ENST00000487252 SYN3O14994 580 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 PRC1O43663 620 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 RECQL4O94761 1208 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 VNN2O95498 520 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 EIF2S3P41091 472 aaKnown RBP12.87□□□□□ -0.35
TRIM56-204ENST00000487252 ARPP19P56211 112 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 AMPD2Q01433 879 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 PTH1RQ03431 593 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 EMC2Q15006 297 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 LYSMD4Q5XG99 296 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 ANO7Q6IWH7 933 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 NFXL1Q6ZNB6 911 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 ARMCX6Q7L4S7 300 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 TMEM87BQ96K49 555 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 CEP170P1Q96L14 293 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 UROC1Q96N76 676 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 EBF3Q9H4W6 596 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 WRAP73Q9P2S5 460 aaPredicted RBP12.87□□□□□ -0.35
TRIM56-204ENST00000487252 YIPF1Q9Y548 306 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 TRIP11Q15643 1979 aa12.87□□□□□ -0.35
TRIM56-204ENST00000487252 ATXN2Q99700 1313 aaKnown RBP12.87□□□□□ -0.35
TRIM56-204ENST00000487252 B8ZZF3 427 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 E9PAM4 449 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 H7C4K7 107 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 TBX3O15119 743 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 USP11P51784 963 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 CAPSQ13938 189 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 NBR1Q14596 966 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 MAP7D1Q3KQU3 841 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 CASC1Q6TDU7 716 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 SGMS1Q86VZ5 419 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 MARCH9Q86YJ5 346 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 REXO1Q8N1G1 1221 aaKnown RBP12.86□□□□□ -0.35
TRIM56-204ENST00000487252 FRMD1Q8N878 549 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 PDCD7Q8N8D1 485 aaKnown RBP12.86□□□□□ -0.35
TRIM56-204ENST00000487252 FAM181AQ8N9Y4 354 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 WBP1Q96G27 269 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 PI4K2AQ9BTU6 479 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 XPNPEP1Q9NQW7 623 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 PCOLCE2Q9UKZ9 415 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 SLC12A7Q9Y666 1083 aa12.86□□□□□ -0.35
TRIM56-204ENST00000487252 PYCARD-AS1I3L0S3 204 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 GJA4P35212 333 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 QARSP47897 775 aaKnown RBP12.85□□□□□ -0.35
TRIM56-204ENST00000487252 TFDP1Q14186 410 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 CRY1Q16526 586 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 Q4G0T1 1027 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 GPR158Q5T848 1215 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 TRIM68Q6AZZ1 485 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 RNF19BQ6ZMZ0 732 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 GPR155Q7Z3F1 870 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 RABEPKQ7Z6M1 372 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 BAHD1Q8TBE0 780 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-204ENST00000487252 USP33Q8TEY7 942 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 RLN3Q8WXF3 142 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 TBC1D32Q96NH3 1257 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
TRIM56-204ENST00000487252 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-204ENST00000487252 ERVH48-1M5A8F1 160 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 SYPP08247 313 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 HNRNPLP14866 589 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms