RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 PALMO75781 387 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 PAEPP09466 180 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 CTSHP09668 335 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 MYBL1P10243 752 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 SKIP12755 728 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 KCNE1P15382 129 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 CD58P19256 250 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 CYP3A5P20815 502 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 ABCB4P21439 1286 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 PNPLA4P41247 253 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 NSFP46459 744 aaKnown RBP7.52□□□□□ -1.21
SF3A3-206ENST00000487062 RAB27AP51159 221 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 ZNF132P52740 706 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 HADHBP55084 474 aaKnown RBP7.52□□□□□ -1.21
SF3A3-206ENST00000487062 HTRA3P83110 453 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 AMPD2Q01433 879 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 MGAT3Q09327 533 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 NFX1Q12986 1120 aaKnown RBP7.52□□□□□ -1.21
SF3A3-206ENST00000487062 TCEAL1Q15170 157 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 UBXN11Q5T124 520 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 LIN9Q5TKA1 542 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 SCARA5Q6ZMJ2 495 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 LRRC52Q8N7C0 313 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 USP38Q8NB14 1042 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 TPCN2Q8NHX9 752 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 SLC35G2Q8TBE7 412 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 CAGE1Q8TC20 777 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 DDX1Q92499 740 aaKnown RBP7.52□□□□□ -1.21
SF3A3-206ENST00000487062 UBXN4Q92575 508 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 PBXIP1Q96AQ6 731 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 ZNF653Q96CK0 615 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 RPGRIP1Q96KN7 1286 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 ZNF560Q96MR9 790 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 PCDHB18PQ96TA0 734 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 APOL6Q9BWW8 343 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.52□□□□□ -1.21
SF3A3-206ENST00000487062 NXF3Q9H4D5 531 aaKnown RBP7.52□□□□□ -1.21
SF3A3-206ENST00000487062 STARD7Q9NQZ5 370 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 CTTNBP2NLQ9P2B4 639 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 PUF60Q9UHX1 559 aaKnown RBP7.52□□□□□ -1.21
SF3A3-206ENST00000487062 SALL4Q9UJQ4 1053 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 GTF3C4Q9UKN8 822 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 AMFRQ9UKV5 643 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 SNX12Q9UMY4 172 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 ST3GAL5Q9UNP4 418 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 USTQ9Y2C2 406 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 IPPQ9Y573 584 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 CEP83Q9Y592 693 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 PTCH2Q9Y6C5 1203 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 GRIN2DO15399 1336 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 A0A1W2PQ45 241 aaPredicted RBP7.51□□□□□ -1.21
SF3A3-206ENST00000487062 A0A1W2PQY0 241 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 CTAGE15A4D2H0 777 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 GRID2IPA4D2P6 1211 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 SPTLC1O15269 473 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 MEFVO15553 781 aaPredicted RBP7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ATMINO43313 823 aaPredicted RBP7.51□□□□□ -1.21
SF3A3-206ENST00000487062 LSM8O95777 96 aaKnown RBP7.51□□□□□ -1.21
SF3A3-206ENST00000487062 CHRNA1P02708 482 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 CYP1A1P04798 512 aaPredicted RBP7.51□□□□□ -1.21
SF3A3-206ENST00000487062 WEE2P0C1S8 567 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 CTAGE8P0CG41 777 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 UNGP13051 313 aaPredicted RBP7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ITGA4P13612 1032 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 AKAP5P24588 427 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 PAFAH1B1P43034 410 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ASPAP45381 313 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 CENPCQ03188 943 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 PAK2Q13177 524 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 RPS6KA1Q15418 735 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ZBTB6Q15916 424 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 XKR4Q5GH76 650 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 FAM26DQ5JW98 314 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 FBXO47Q5MNV8 452 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 MEI1Q5TIA1 1274 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 CCDC181Q5TID7 509 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ASTLQ6HA08 431 aaPredicted RBP7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ALKAL1Q6UXT8 129 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 PEX26Q7Z412 305 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 DAAM2Q86T65 1068 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 CTAGE6Q86UF2 777 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 PALB2Q86YC2 1186 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 CTAGE4Q8IX94 777 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 TMEM35BQ8NCS4 154 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 MSANTD4Q8NCY6 345 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 SMG8Q8ND04 991 aaKnown RBP7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ZNF606Q8WXB4 792 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 GOLGA1Q92805 767 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 VCPIP1Q96JH7 1222 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 RPS6KC1Q96S38 1066 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 OSBPL9Q96SU4 736 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 MMS19Q96T76 1030 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 SELENOOQ9BVL4 669 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ZNF518BQ9C0D4 1074 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 THAP2Q9H0W7 228 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ERVK-5Q9HDB9 667 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 ACP6Q9NPH0 428 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 FAM105AQ9NUU6 356 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 SLC38A7Q9NVC3 462 aa7.51□□□□□ -1.21
SF3A3-206ENST00000487062 TAS2R14Q9NYV8 317 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms