RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 GPBP1Q86WP2 473 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 PROSER1Q86XN7 944 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 HSCBQ8IWL3 235 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 C12orf50Q8NA57 414 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 RASSF8Q8NHQ8 419 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 ING5Q8WYH8 240 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 NELL2Q99435 816 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 ACO2Q99798 780 aaKnown RBP7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 NTPCRQ9BSD7 190 aaKnown RBP7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 MRPL4Q9BYD3 311 aaKnown RBP7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 CCSER1Q9C0I3 900 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 CDT1Q9H211 546 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 ZSCAN16Q9H4T2 348 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 BLOC1S4Q9NUP1 217 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 POLR3BQ9NW08 1133 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 LARSQ9P2J5 1176 aaKnown RBP7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 KCNG1Q9UIX4 513 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 ODF2LQ9ULJ1 636 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 MTMR6Q9Y217 621 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 SSX2IPQ9Y2D8 614 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 MORC2Q9Y6X9 1032 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 VWA8A3KMH1 1905 aa7.03□□□□□ -1.28
CTDSPL-208ENST00000486978 NCANO14594 1321 aa7.02□□□□□ -1.28
CTDSPL-208ENST00000486978 MYH11P35749 1972 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 NPHP3-ACAD11A0A0J9YXS1 232 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 H0YCG3 227 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 ABLIM1O14639 778 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 NCAM2O15394 837 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 CCL16O15467 120 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 ZMYND10O75800 440 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 PROZP22891 400 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 FCARP24071 287 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 MARCKSP29966 332 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 GRM5P41594 1212 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 CXCL12P48061 93 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 GLUD2P49448 558 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 YARSP54577 528 aaKnown RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 DSG1Q02413 1049 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 STRN3Q13033 797 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 DHX8Q14562 1220 aaKnown RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 MCM6Q14566 821 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 HSP90AA2PQ14568 343 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 NAB2Q15742 525 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 ARSHQ5FYA8 562 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 FUT10Q6P4F1 479 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 FAM173BQ6P4H8 233 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 MPZL3Q6UWV2 235 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 NPAS3Q8IXF0 933 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 GPR65Q8IYL9 337 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 TMEM161BQ8NDZ6 487 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 LRRC15Q8TF66 581 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 HNRNPLLQ8WVV9 542 aaKnown RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 LARP4BQ92615 738 aaKnown RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 RAD54LQ92698 747 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 MCRS1Q96EZ8 462 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 EPSTI1Q96J88 318 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 HNRNPABQ99729 332 aaKnown RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 REEP2Q9BRK0 252 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 CCDC94Q9BW85 323 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 TARS2Q9BW92 718 aaKnown RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 PTPRHQ9HD43 1115 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 TOPORSQ9NS56 1045 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 ZDHHC7Q9NXF8 308 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 CACNG4Q9UBN1 327 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 FBXO2Q9UK22 296 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 ADAM28Q9UKQ2 775 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 GDAQ9Y2T3 454 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 MSRB2Q9Y3D2 182 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 SRPRBQ9Y5M8 271 aaKnown RBP7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 TEX15Q9BXT5 2789 aa7.02□□□□□ -1.29
CTDSPL-208ENST00000486978 SF3B1O75533 1304 aaKnown RBP eCLIP7.01□□□□□ -1.296e-10■■■■■ 187.2
CTDSPL-208ENST00000486978 ZNF462Q96JM2 2506 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CASTOR2A6NHX0 329 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CDX4O14627 284 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 ADAM12O43184 909 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 TBCAO75347 108 aaKnown RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 TADA2AO75478 443 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 TOM1L1O75674 476 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PPP1R37O75864 691 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 FAM13AO94988 1023 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 KIF4AO95239 1232 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 KRT18P05783 430 aaKnown RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 ADH1AP07327 375 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 HSP90AA1P07900 732 aaKnown RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 MAPTP10636 758 aaKnown RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 MCF2P10911 925 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PDIA4P13667 645 aaKnown RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PLA2G2AP14555 144 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 SCP2P22307 547 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 TXLNAP40222 546 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 NASPP49321 788 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CCR3P51677 355 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 ZNF131P52739 623 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 NCKAP1LP55160 1127 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 PFKPQ01813 784 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 CEBPZQ03701 1054 aaKnown RBP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 NOLC1Q14978 699 aaKnown RBP eCLIP7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 SLC39A14Q15043 492 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 SLC5A9Q2M3M2 681 aa7.01□□□□□ -1.29
CTDSPL-208ENST00000486978 USP41Q3LFD5 358 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms