RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 FHDC1Q9C0D6 1143 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 IMPAD1Q9NX62 359 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SNX12Q9UMY4 172 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 MYO3BQ8WXR4 1341 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 CYP21A2P08686 494 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SLC1A1P43005 524 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 GCLMP48507 274 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 CHI3L2Q15782 390 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 FUT11Q495W5 492 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 AKIRIN2Q53H80 203 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 CCNI2Q6ZMN8 369 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 ZNF467Q7Z7K2 595 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 TTC30AQ86WT1 665 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 CENPLQ8N0S6 344 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 SIX5Q8N196 739 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 TBC1D19Q8N5T2 526 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SH3TC2Q8TF17 1288 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 RFFLQ8WZ73 363 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 WDR24Q96S15 920 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 ROPN1BQ9BZX4 212 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 ROPN1Q9HAT0 212 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 MTRF1O75570 445 aaKnown RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 SERPINB8P50452 374 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 NFIL3Q16649 462 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SYCP2LQ5T4T6 812 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 LAYNQ6UX15 382 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 LPCAT2Q7L5N7 544 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 ASIC4Q96FT7 647 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 KIAA1586Q9HCI6 787 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 TMEM120BA0PK00 339 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 RTN2O75298 545 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 TSPAN9O75954 239 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 CLPTM1O96005 669 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 MLNP12872 115 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 FAM83BQ5T0W9 1011 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 ARMC4Q5T2S8 1044 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 ELMSAN1Q6PJG2 1045 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 TRIM72Q6ZMU5 477 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SPICE1Q8N0Z3 855 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 ZNF579Q8NAF0 562 aaKnown RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 RBM46Q8TBY0 533 aaKnown RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 CDHR1Q96JP9 859 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 ZIM3Q96PE6 472 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 MOV10L1Q9BXT6 1211 aaKnown RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SLC7A5P2Q9GIP4 190 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SERHL2Q9H4I8 314 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 DHX35Q9H5Z1 703 aaKnown RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 SERHLQ9NQF3 203 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 ARHGEF38Q9NXL2 777 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 CD274Q9NZQ7 290 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SERPINB13Q9UIV8 391 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SLIT3O75094 1523 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 PRAMEF22A3QJZ6 481 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 K7ERI5 159 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 EIF3DO15371 548 aaKnown RBP eCLIP9.16□□□□□ -0.94
GABRE-209ENST00000486255 ATP6V1G2O95670 118 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SLC16A1P53985 500 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 OTUD4Q01804 1114 aaKnown RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 CHRNDQ07001 517 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 TRIQKQ629K1 86 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 ZNF746Q6NUN9 644 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 KRT73Q86Y46 540 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 RIBC1Q8N443 379 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 MARCH10Q8NA82 808 aaPredicted RBP9.16□□□□□ -0.94
GABRE-209ENST00000486255 ATAD3AQ9NVI7 634 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SETD1AO15047 1707 aaKnown RBP9.15□□□□□ -0.94
GABRE-209ENST00000486255 UBN2Q6ZU65 1347 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 PDE9AO76083 593 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 SERPIND1P05546 499 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 ALDH6A1Q02252 535 aaKnown RBP9.15□□□□□ -0.94
GABRE-209ENST00000486255 USP10Q14694 798 aaKnown RBP9.15□□□□□ -0.94
GABRE-209ENST00000486255 SYTL3Q4VX76 610 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 KLHL12Q53G59 568 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 PDZK1Q5T2W1 519 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 PIGBQ92521 554 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 MCRS1Q96EZ8 462 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 NARS2Q96I59 477 aaKnown RBP9.15□□□□□ -0.94
GABRE-209ENST00000486255 ANKRD27Q96NW4 1050 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 QKIQ96PU8 341 aaKnown RBP eCLIP9.15□□□□□ -0.94
GABRE-209ENST00000486255 TAF4O00268 1085 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 ITGAXP20702 1163 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 ADORA1P30542 326 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 SARSP49591 514 aaKnown RBP9.15□□□□□ -0.94
GABRE-209ENST00000486255 IRAK1P51617 712 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 KCTD2Q14681 263 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 LRRC49Q8IUZ0 686 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 ASAP3Q8TDY4 903 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 PIGOQ8TEQ8 1089 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 DHX36Q9H2U1 1008 aaKnown RBP9.15□□□□□ -0.94
GABRE-209ENST00000486255 LOC102724428A0A0B4J2F2 783 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 SCTRP47872 440 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 SIK1P57059 783 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 PTPN12Q05209 780 aaKnown RBP9.15□□□□□ -0.94
GABRE-209ENST00000486255 ITGB3BPQ13352 177 aaPredicted RBP9.15□□□□□ -0.94
GABRE-209ENST00000486255 NCF4Q15080 339 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 SLC10A5Q5PT55 438 aa9.15□□□□□ -0.94
GABRE-209ENST00000486255 UXS1Q8NBZ7 420 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms