RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SLFN14P0C7P3 912 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 TYMPP19971 482 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 CMA1P23946 247 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 POU5F1Q01860 360 aaKnown RBP19.06■□□□□ 0.64
COL6A1-204ENST00000486023 IER5LQ5T953 404 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 SCARA3Q6AZY7 606 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 IQCEQ6IPM2 695 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 PARM1Q6UWI2 310 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 RTL10Q7L3V2 364 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 HS6ST3Q8IZP7 471 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 THEM5Q8N1Q8 247 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 SCFD1Q8WVM8 642 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 RPP25Q9BUL9 199 aaKnown RBP19.06■□□□□ 0.64
COL6A1-204ENST00000486023 PVALEFA0A1B0GWK0 134 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 ARHGEF37A1IGU5 675 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 KPNA7A9QM74 516 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 EIF3DO15371 548 aaKnown RBP eCLIP19.05■□□□□ 0.64
COL6A1-204ENST00000486023 ACTN4O43707 911 aaKnown RBP19.05■□□□□ 0.64
COL6A1-204ENST00000486023 TMEM191BP0C7N4 346 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 MYL4P12829 197 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 VCPP55072 806 aaKnown RBP19.05■□□□□ 0.64
COL6A1-204ENST00000486023 BFSP1Q12934 665 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 SV2CQ496J9 727 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 SLC39A12Q504Y0 691 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 CYP4A22Q5TCH4 519 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 WSCD1Q658N2 575 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 EPM2AIP1Q7L775 607 aaPredicted RBP19.05■□□□□ 0.64
COL6A1-204ENST00000486023 NT5DC4Q86YG4 428 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 ATAD1Q8NBU5 361 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 TCEAL4Q96EI5 215 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 MTMR12Q9C0I1 747 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 CA14Q9ULX7 337 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 DUSP12Q9UNI6 340 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 MYH15Q9Y2K3 1946 aa19.05■□□□□ 0.64
COL6A1-204ENST00000486023 MYO10Q9HD67 2058 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 TGFB1I1O43294 461 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 SOAT2O75908 522 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 RFX1P22670 979 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 AVPR2P30518 371 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 SYKP43405 635 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 NDUFA8P51970 172 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 GPR17Q13304 367 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 HTR4Q13639 388 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 SLC5A9Q2M3M2 681 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 CNNM4Q6P4Q7 775 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 PDZD4Q76G19 769 aaPredicted RBP19.04■□□□□ 0.64
COL6A1-204ENST00000486023 HS2ST1Q7LGA3 356 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 SIX5Q8N196 739 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 C1orf127Q8N9H9 656 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 FSIP1Q8NA03 581 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 FGF14Q92915 247 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 CCDC127Q96BQ5 260 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 ANKRD36BP1Q96IX9 119 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 ZNF560Q96MR9 790 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 KXD1Q9BQD3 176 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 OXCT2Q9BYC2 517 aaPredicted RBP19.04■□□□□ 0.64
COL6A1-204ENST00000486023 SCAND2PQ9GZW5 306 aaPredicted RBP19.04■□□□□ 0.64
COL6A1-204ENST00000486023 CRISPLD1Q9H336 500 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 AGPAT3Q9NRZ7 376 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 EXOC1Q9NV70 894 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 CEP72Q9P209 647 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 DSEQ9UL01 958 aa19.04■□□□□ 0.64
COL6A1-204ENST00000486023 KIAA0391O15091 583 aaKnown RBP19.03■□□□□ 0.64
COL6A1-204ENST00000486023 POU2F2P09086 479 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 DLATP10515 647 aaKnown RBP19.03■□□□□ 0.64
COL6A1-204ENST00000486023 GJA1P17302 382 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 CEBPBP17676 345 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 PAX3P23760 479 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 ALDH1A3P47895 512 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 KMT5BQ4FZB7 885 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 NPAS3Q8IXF0 933 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 OR5B17Q8NGF7 314 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 OR10T2Q8NGX3 314 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 FAM200AQ8TCP9 573 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 NXPE3Q969Y0 559 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 BORCS6Q96GS4 357 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 SEPT5Q99719 369 aaPredicted RBP19.03■□□□□ 0.64
COL6A1-204ENST00000486023 YIPF1Q9Y548 306 aa19.03■□□□□ 0.64
COL6A1-204ENST00000486023 ZFP37Q9Y6Q3 630 aaPredicted RBP19.03■□□□□ 0.64
COL6A1-204ENST00000486023 MTCL1Q9Y4B5 1905 aaKnown RBP19.02■□□□□ 0.64
COL6A1-204ENST00000486023 MTMR11A4FU01 709 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 VNN2O95498 520 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 TNNC2P02585 160 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 TNNI1P19237 187 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 PNPLA4P41247 253 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 EPHB3P54753 998 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 RBP5P82980 135 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 STK4Q13043 487 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 MYBPC2Q14324 1141 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 SNRNP35Q16560 246 aaKnown RBP19.02■□□□□ 0.64
COL6A1-204ENST00000486023 MGAT5BQ3V5L5 792 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 CENPPQ6IPU0 288 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 GPR152Q8TDT2 470 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 FNBP1Q96RU3 617 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 INTS13Q9NVM9 706 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 SNX9Q9Y5X1 595 aa19.02■□□□□ 0.64
COL6A1-204ENST00000486023 PTPRJQ12913 1337 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 ANHXE9PGG2 379 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 ZNF197O14709 1029 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 KLRC4O43908 158 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms