RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SCRN1Q12765 414 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 PABPC4Q13310 644 aaKnown RBP eCLIP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 SYCP1Q15431 976 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ZNF827Q17R98 1081 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ATP13A4Q4VNC1 1196 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 NUGGCQ68CJ6 796 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 CREB3L3Q68CJ9 461 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 GALNT17Q6IS24 598 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 C6orf15Q6UXA7 325 aaPredicted RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 BEND5Q7L4P6 421 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ANKRD18AQ8IVF6 992 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 TPH2Q8IWU9 490 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ELOA2Q8IYF1 753 aaPredicted RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 MYOCDQ8IZQ8 938 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 CARNMT1Q8N4J0 409 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 LZTR1Q8N653 840 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 KIAA1524Q8TCG1 905 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 DDX1Q92499 740 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 RCC1LQ96I51 464 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 KAZALD1Q96I82 304 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 CNDP2Q96KP4 475 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 SPATA17Q96L03 361 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 NOX5Q96PH1 765 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 SLX1AQ9BQ83 275 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 TACO1Q9BSH4 297 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 TCHPQ9BT92 498 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ISCA1Q9BUE6 129 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 LSM14BQ9BX40 385 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 MAK16Q9BXY0 300 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 SLC13A1Q9BZW2 595 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 PUS7LQ9H0K6 701 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ELAC1Q9H777 363 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ZWILCHQ9H900 591 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 TRMT13Q9NUP7 481 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ABCF3Q9NUQ8 709 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 BTG4Q9NY30 223 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 TMOD4Q9NZQ9 345 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 NFKBIL1Q9UBC1 381 aaPredicted RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 CLIP2Q9UDT6 1046 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 EMC9Q9Y3B6 208 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ATP6V0A2Q9Y487 856 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 PAXBP1Q9Y5B6 917 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 CYP46A1Q9Y6A2 500 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 PMF1-BGLAPU3KQ54 211 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ZNF142P52746 1687 aaPredicted RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 FER1L4A9Z1Z3 1794 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 LTN1O94822 1766 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 C7orf72A4D263 438 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 GSG1L2A8MUP6 293 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 B4DLN1 442 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 MAFKO60675 156 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 DKC1O60832 514 aaKnown RBP eCLIP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 CLASP2O75122 1294 aaKnown RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 CD4P01730 458 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 FUCA1P04066 466 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 ASGR2P07307 311 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 GLI4P10075 376 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 SFTPCP11686 197 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 EEF2P13639 858 aaKnown RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 PAMP19021 973 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 CASTP20810 708 aaKnown RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 CCND1P24385 295 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 GJB2P29033 226 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 KRT9P35527 623 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 KCNJ6P48051 423 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 LIMK1P53667 647 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 ZXDAP98168 799 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 PTH1RQ03431 593 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 KRT32Q14532 448 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 GRM3Q14832 879 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 TARBP2Q15633 366 aaKnown RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 ME3Q16798 604 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 PTPN21Q16825 1174 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 RABL6Q3YEC7 729 aaPredicted RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 AP1ARQ63HQ0 302 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF530Q6P9A1 599 aaPredicted RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 CRTC1Q6UUV9 634 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 BTNL9Q6UXG8 535 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 MILR1Q7Z6M3 343 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 RTKN2Q8IZC4 609 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 FBXL16Q8N461 479 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 BVESQ8NE79 360 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 NLGN2Q8NFZ4 835 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 RASSF8Q8NHQ8 419 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 ANKRD49Q8WVL7 239 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 CTNNBL1Q8WYA6 563 aaPredicted RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF75CPQ92670 426 aaPredicted RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 FERMT2Q96AC1 680 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 EAF2Q96CJ1 260 aaPredicted RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 RSRC1Q96IZ7 334 aaKnown RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 CHAMP1Q96JM3 812 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 FAM81BQ96LP2 452 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 BARD1Q99728 777 aaKnown RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 SYT3Q9BQG1 590 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 ADPGKQ9BRR6 497 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 SCAND2PQ9GZW5 306 aaPredicted RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 SPATA6Q9NWH7 488 aaPredicted RBP4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 AIPL1Q9NZN9 384 aa4.4□□□□□ -1.71
PRPF38B-205ENST00000485810 PDP2Q9P2J9 529 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 592 ms