RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 BRCC3P46736 316 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 EPHA5P54756 1037 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 TWF1Q12792 350 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 PRPF4BQ13523 1007 aaKnown RBP13.35□□□□□ -0.27
SSR4-210ENST00000485612 KARSQ15046 597 aaKnown RBP13.35□□□□□ -0.27
SSR4-210ENST00000485612 ZNF174Q15697 407 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 TMEM132AQ24JP5 1023 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 ARHGAP29Q52LW3 1261 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 GLRA4Q5JXX5 417 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 PADI6Q6TGC4 694 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 SHKBP1Q8TBC3 707 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 LRRC3BQ96PB8 259 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 BBC3Q96PG8 261 aaPredicted RBP13.35□□□□□ -0.27
SSR4-210ENST00000485612 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 MKNK1Q9BUB5 465 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 POLR3CQ9BUI4 534 aaPredicted RBP13.35□□□□□ -0.27
SSR4-210ENST00000485612 POLR3BQ9NW08 1133 aaPredicted RBP13.35□□□□□ -0.27
SSR4-210ENST00000485612 GDAQ9Y2T3 454 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 DENND4CQ5VZ89 1909 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 TSC2P49815 1807 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 SPAARA0A1B0GVQ0 90 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 FAM221BA6H8Z2 402 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 PATE3B3GLJ2 98 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 DPYSL4O14531 572 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 OR52Z1P0C646 297 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 CYP11B2P19099 503 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 GBP1P32455 592 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 IRX4P78413 519 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 NBR1Q14596 966 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 UPP1Q16831 310 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 TPGS2Q68CL5 300 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
SSR4-210ENST00000485612 CCDC83Q8IWF9 413 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 ADAM32Q8TC27 787 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 HHIPQ96QV1 700 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 NACC1Q96RE7 527 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 C2orf40Q9H1Z8 148 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 GOLGA2P5Q9HBQ8 144 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 FREM2Q5SZK8 3169 aa13.34□□□□□ -0.27
SSR4-210ENST00000485612 ASH1LQ9NR48 2969 aaKnown RBP13.33□□□□□ -0.28
SSR4-210ENST00000485612 A0A1W2PRU2 124 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 ARHGEF35A5YM69 484 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 H0Y626 953 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 H7C4K7 107 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 ACKR2O00590 384 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 MEFVO15553 781 aaPredicted RBP13.33□□□□□ -0.28
SSR4-210ENST00000485612 TRIM16O95361 564 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 RPA1P27694 616 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 SIM1P81133 766 aaPredicted RBP13.33□□□□□ -0.28
SSR4-210ENST00000485612 TNK2Q07912 1038 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 GRSF1Q12849 480 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSR4-210ENST00000485612 PTPAQ15257 358 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 MAPK6Q16659 721 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 ITPRIPL2Q3MIP1 535 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 NT5DC1Q5TFE4 455 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 CEP120Q8N960 986 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 C3orf58Q8NDZ4 430 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 UROC1Q96N76 676 aa13.33□□□□□ -0.28
SSR4-210ENST00000485612 ITPR1Q14643 2758 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 FLNBO75369 2602 aaKnown RBP13.32□□□□□ -0.28
SSR4-210ENST00000485612 SCN1AP35498 2009 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 ATG2BQ96BY7 2078 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 NUP210Q8TEM1 1887 aaPredicted RBP13.32□□□□□ -0.28
SSR4-210ENST00000485612 NAMPTP43490 491 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 SCAPQ12770 1279 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 TTC38Q5R3I4 469 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 CHCHD4Q8N4Q1 142 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 C4orf32Q8N8J7 132 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 GLIS3Q8NEA6 775 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 DEPTORQ8TB45 409 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 HNRNPLLQ8WVV9 542 aaKnown RBP13.32□□□□□ -0.28
SSR4-210ENST00000485612 C8orf76Q96K31 380 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 PPP1R10Q96QC0 940 aaKnown RBP13.32□□□□□ -0.28
SSR4-210ENST00000485612 ADPGKQ9BRR6 497 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 BHMT2Q9H2M3 363 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 EBF1Q9UH73 591 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 FBXL5Q9UKA1 691 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 MAFFQ9ULX9 164 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
SSR4-210ENST00000485612 OBSL1O75147 1896 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 RNF40O75150 1001 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 APBB3O95704 486 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 CCT6AP40227 531 aaKnown RBP13.31□□□□□ -0.28
SSR4-210ENST00000485612 PLCB2Q00722 1185 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
SSR4-210ENST00000485612 SOX4Q06945 474 aaPredicted RBP13.31□□□□□ -0.28
SSR4-210ENST00000485612 LMAN2Q12907 356 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 MRPL58Q14197 206 aaKnown RBP13.31□□□□□ -0.28
SSR4-210ENST00000485612 SAFBQ15424 915 aaKnown RBP eCLIP13.31□□□□□ -0.28
SSR4-210ENST00000485612 CTXN3Q4LDR2 81 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 ATF7IP2Q5U623 682 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 PMS2CLQ68D20 193 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 CYP2U1Q7Z449 544 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 C11orf74Q86VG3 221 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 ERMNQ8TAM6 284 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 OBP2AQ9NY56 170 aa13.31□□□□□ -0.28
SSR4-210ENST00000485612 AFF4Q9UHB7 1163 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms