RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PATJQ8NI35 1801 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 OTOGLQ3ZCN5 2332 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 A0A1W2PRU2 124 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 MTMR11A4FU01 709 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 HEPACAM2A8MVW5 462 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 TISP43B9A030 160 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 MAN2B1O00754 1011 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 TBCAO75347 108 aaKnown RBP20.87■□□□□ 0.93
COL27A1-205ENST00000485397 BMP15O95972 392 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 SCP2P22307 547 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 EPHB3P54753 998 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 GTF2BQ00403 316 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 ZC2HC1CQ53FD0 456 aaPredicted RBP20.87■□□□□ 0.93
COL27A1-205ENST00000485397 C9orf57Q5W0N0 161 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 GPIHBP1Q8IV16 184 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 ZNF687Q8N1G0 1237 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 TTC9BQ8N6N2 239 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 DEPDC1BQ8WUY9 529 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 RMDN1Q96DB5 314 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 RSPRY1Q96DX4 576 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 TSPAN18Q96SJ8 248 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 SLITRK6Q9H5Y7 841 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 TRPV4Q9HBA0 871 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 GPR179Q6PRD1 2367 aa20.87■□□□□ 0.93
COL27A1-205ENST00000485397 F5P12259 2224 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 ZNF263O14978 683 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 SOAT2O75908 522 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 ACOT2P49753 483 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 MTAPQ13126 283 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 PLD1Q13393 1074 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 MYBPC2Q14324 1141 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 ERMP1Q7Z2K6 904 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 BRAPQ7Z569 592 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 MFSD6LQ8IWD5 586 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 CD302Q8IX05 232 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 ATRIPQ8WXE1 791 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 LARP4BQ92615 738 aaKnown RBP20.86■□□□□ 0.93
COL27A1-205ENST00000485397 IKZF4Q9H2S9 585 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 PCDHGA2Q9Y5H1 932 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 PIAS3Q9Y6X2 628 aa20.86■□□□□ 0.93
COL27A1-205ENST00000485397 PIRO00625 290 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 ODC1P11926 461 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 DDIT3P35638 169 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 ALDH1A3P47895 512 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 CDR1P51861 262 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 TMEM132DQ14C87 1099 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 STXBP5Q5T5C0 1151 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 ADALQ6DHV7 355 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 ARMCX5Q6P1M9 558 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 USP49Q70CQ1 688 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 ZBTB44Q8NCP5 570 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 OR10T2Q8NGX3 314 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 FAM3CQ92520 227 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 NELL1Q92832 810 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 CCSER1Q9C0I3 900 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 GPR88Q9GZN0 384 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 UPF2Q9HAU5 1272 aaKnown RBP20.85■□□□□ 0.93
COL27A1-205ENST00000485397 TRPV5Q9NQA5 729 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 PRMT8Q9NR22 394 aaPredicted RBP20.85■□□□□ 0.93
COL27A1-205ENST00000485397 ZSCAN32Q9NX65 697 aa20.85■□□□□ 0.93
COL27A1-205ENST00000485397 ANO9A1A5B4 782 aa20.84■□□□□ 0.93
COL27A1-205ENST00000485397 DNAJB7Q7Z6W7 309 aaPredicted RBP20.84■□□□□ 0.93
COL27A1-205ENST00000485397 EPSTI1Q96J88 318 aa20.84■□□□□ 0.93
COL27A1-205ENST00000485397 CHRDQ9H2X0 955 aa20.84■□□□□ 0.93
COL27A1-205ENST00000485397 LMAN1LQ9HAT1 526 aa20.84■□□□□ 0.93
COL27A1-205ENST00000485397 ARNTLO00327 626 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 CENPBP07199 599 aaPredicted RBP20.83■□□□□ 0.93
COL27A1-205ENST00000485397 CCNE1P24864 410 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 GAREM2Q75VX8 874 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 DYMQ7RTS9 669 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 ARID3BQ8IVW6 561 aaPredicted RBP20.83■□□□□ 0.93
COL27A1-205ENST00000485397 PSMG2Q969U7 264 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 MKNK1Q9BUB5 465 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 ATXN3LQ9H3M9 355 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 ST6GALNAC4Q9H4F1 302 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 ASB7Q9H672 318 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 AGO2Q9UKV8 859 aaKnown RBP20.83■□□□□ 0.93
COL27A1-205ENST00000485397 DERAQ9Y315 318 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 CLIC4Q9Y696 253 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 STYXL1Q9Y6J8 313 aa20.83■□□□□ 0.93
COL27A1-205ENST00000485397 COL4A2P08572 1712 aa20.83■□□□□ 0.92
COL27A1-205ENST00000485397 VPS37CA5D8V6 355 aaPredicted RBP20.82■□□□□ 0.92
COL27A1-205ENST00000485397 LILRB5O75023 590 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 CYP11A1P05108 521 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 SLC39A12Q504Y0 691 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 SLFN12LQ6IEE8 588 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 ZNF720Q7Z2F6 126 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 SFR1Q86XK3 245 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 YAF2Q8IY57 180 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 KRI1Q8N9T8 703 aaKnown RBP20.82■□□□□ 0.92
COL27A1-205ENST00000485397 E2F7Q96AV8 911 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 BORCS6Q96GS4 357 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 LRRC3BQ96PB8 259 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 LPIN3Q9BQK8 851 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 NCDNQ9UBB6 729 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 C2CD2Q9Y426 696 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 ASB3Q9Y575 518 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 TICRRQ7Z2Z1 1910 aa20.82■□□□□ 0.92
COL27A1-205ENST00000485397 CYB561D2O14569 222 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 PAX3P23760 479 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms