RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 ZNF558Q96NG5 402 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 EIF2AK1Q9BQI3 630 aaKnown RBP6.93□□□□□ -1.3
SORT1-206ENST00000485149 SLC26A6Q9BXS9 759 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 TRIM8Q9BZR9 551 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 TNKS2Q9H2K2 1166 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 SFXN1Q9H9B4 322 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 ARHGEF3Q9NR81 526 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 RGS18Q9NS28 235 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 RBM28Q9NW13 759 aaKnown RBP6.93□□□□□ -1.3
SORT1-206ENST00000485149 TMEM161AQ9NX61 479 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 IP6K2Q9UHH9 426 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 PCDHGB3Q9Y5G1 929 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 LOXHD1Q8IVV2 1947 aa6.93□□□□□ -1.3
SORT1-206ENST00000485149 DENND3A2RUS2 1198 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 LILRB5O75023 590 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 RFPL3O75679 317 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 MICAL2O94851 1124 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 LARGE1O95461 756 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 NCAM1P13591 858 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 EPCAMP16422 314 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 CA8P35219 290 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 TSPAN7P41732 249 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 SCTRP47872 440 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 GIPRP48546 466 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 NAPAP54920 295 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 EVCP57679 992 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 MRPS9P82933 396 aaKnown RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 STRN3Q13033 797 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 CLN3Q13286 438 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 LETM2Q2VYF4 491 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 C15orf39Q6ZRI6 1047 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 RSRC2Q7L4I2 434 aaKnown RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 CABP7Q86V35 215 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 PPFIBP1Q86W92 1011 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 LRRC43Q8N309 656 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 FBXL16Q8N461 479 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 SLC44A3Q8N4M1 653 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 RNF217Q8TC41 542 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 GPR152Q8TDT2 470 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 CUL5Q93034 780 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 NKD1Q969G9 470 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 CCDC47Q96A33 483 aaKnown RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 ZNF274Q96GC6 653 aaPredicted RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 AIFM3Q96NN9 605 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 INSM2Q96T92 566 aaPredicted RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 NELL2Q99435 816 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 KIF2CQ99661 725 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 BCO2Q9BYV7 579 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 CELF4Q9BZC1 486 aaKnown RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 C22orf23Q9BZE7 217 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 TMEM117Q9H0C3 514 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 FAM49AQ9H0Q0 323 aaPredicted RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 CXorf56Q9H5V9 222 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 ELAC1Q9H777 363 aaKnown RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 ATP6V0A4Q9HBG4 840 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 PARD6AQ9NPB6 346 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 LUC7LQ9NQ29 371 aaKnown RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 GJB4Q9NTQ9 266 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 SPATA6Q9NWH7 488 aaPredicted RBP6.92□□□□□ -1.3
SORT1-206ENST00000485149 ZSCAN32Q9NX65 697 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 ERAP1Q9NZ08 941 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 SPG21Q9NZD8 308 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 TRHDEQ9UKU6 1024 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 PCDHA6Q9UN73 950 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 TELO2Q9Y4R8 837 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 PCDHA8Q9Y5H6 950 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 IRAK3Q9Y616 596 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 CNTNAP5Q8WYK1 1306 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 KDM3AQ9Y4C1 1321 aa6.92□□□□□ -1.3
SORT1-206ENST00000485149 SPEGQ15772 3267 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 CCDC196A0A1B0GTZ2 297 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.91□□□□□ -1.3
SORT1-206ENST00000485149 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.91□□□□□ -1.3
SORT1-206ENST00000485149 PABPN1LA6NDY0 278 aaKnown RBP6.91□□□□□ -1.3
SORT1-206ENST00000485149 RRN3P2A6NIE6 340 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 SPATA31C2B4DYI2 1134 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 C9IYK1 514 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 GABRDO14764 452 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 WIPF1O43516 503 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 MGEA5O60502 916 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 GREM1O60565 184 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 LRP3O75074 770 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 CTDNEP1O95476 244 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 CXCL14O95715 111 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 VSIG8P0DPA2 414 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 FGFR1P11362 822 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 GLULP15104 373 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 TCF7P36402 384 aaPredicted RBP6.91□□□□□ -1.3
SORT1-206ENST00000485149 PBX3P40426 434 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 CTSOP43234 321 aaPredicted RBP6.91□□□□□ -1.3
SORT1-206ENST00000485149 STARD6P59095 220 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 AKAP17AQ02040 695 aaKnown RBP6.91□□□□□ -1.3
SORT1-206ENST00000485149 CSTF1Q05048 431 aaKnown RBP6.91□□□□□ -1.3
SORT1-206ENST00000485149 SPEM2Q0P670 501 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 TMEM62Q0P6H9 643 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 SCRN1Q12765 414 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 TRAF1Q13077 416 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 TBX2Q13207 712 aaPredicted RBP6.91□□□□□ -1.3
SORT1-206ENST00000485149 GRM3Q14832 879 aa6.91□□□□□ -1.3
SORT1-206ENST00000485149 PTPN14Q15678 1187 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms