RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ZNF132P52740 706 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 RNASELQ05823 741 aaKnown RBP21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 DSC1Q08554 894 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 PPIGQ13427 754 aaKnown RBP eCLIP21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 EIF3CQ99613 913 aaKnown RBP21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 DESI2Q9BSY9 194 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 MRPL9Q9BYD2 267 aaKnown RBP21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 AMHP03971 560 aa21.86■■□□□ 1.09
VCPKMT-203ENST00000484763 ACRP10323 421 aa21.86■■□□□ 1.09
VCPKMT-203ENST00000484763 CYP11B1P15538 503 aa21.86■■□□□ 1.09
VCPKMT-203ENST00000484763 CDH8P55286 799 aa21.86■■□□□ 1.09
VCPKMT-203ENST00000484763 INCA1Q0VD86 236 aa21.86■■□□□ 1.09
VCPKMT-203ENST00000484763 FAM193BQ96PV7 902 aaPredicted RBP21.86■■□□□ 1.09
VCPKMT-203ENST00000484763 PAAF1Q9BRP4 392 aa21.86■■□□□ 1.09
VCPKMT-203ENST00000484763 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.86■■□□□ 1.09
VCPKMT-203ENST00000484763 SPTLC3Q9NUV7 552 aa21.86■■□□□ 1.09
VCPKMT-203ENST00000484763 CCDC175P0C221 793 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 FPGSQ05932 587 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 BMS1Q14692 1282 aaKnown RBP21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 NOP9Q86U38 636 aaKnown RBP21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 C3orf58Q8NDZ4 430 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 BADQ92934 168 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 SYT11Q9BT88 431 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 ACP6Q9NPH0 428 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 ADAMTS1Q9UHI8 967 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 NOCTQ9UK39 431 aaKnown RBP21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 ADGRG1Q9Y653 693 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 ESPNB1AK53 854 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 CILPO75339 1184 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 DDHD2O94830 711 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 LCA5LO95447 670 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 PAX3P23760 479 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 GATMP50440 423 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 GFPT1Q06210 699 aaPredicted RBP21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 SPA17Q15506 151 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 SLC18A3Q16572 532 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 COL13A1Q5TAT6 717 aaPredicted RBP21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 ZNF280BQ86YH2 543 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 TOP6BLQ8N6T0 577 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 ACRBPQ8NEB7 543 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 APPL2Q8NEU8 664 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 SLC20A1Q8WUM9 679 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 AGPAT1Q99943 283 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 PCDH10Q9P2E7 1040 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 BARX2Q9UMQ3 279 aaPredicted RBP21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 PPP2R2CQ9Y2T4 447 aa21.85■■□□□ 1.09
VCPKMT-203ENST00000484763 TBKBP1A7MCY6 615 aa21.84■■□□□ 1.09
VCPKMT-203ENST00000484763 HUS1O60921 280 aa21.84■■□□□ 1.09
VCPKMT-203ENST00000484763 UPP2O95045 317 aa21.84■■□□□ 1.09
VCPKMT-203ENST00000484763 GNA15P30679 374 aa21.84■■□□□ 1.09
VCPKMT-203ENST00000484763 WDR5P61964 334 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-203ENST00000484763 KRT83P78385 493 aa21.84■■□□□ 1.09
VCPKMT-203ENST00000484763 SOWAHAQ2M3V2 549 aa21.84■■□□□ 1.09
VCPKMT-203ENST00000484763 ZNF677Q86XU0 584 aa21.84■■□□□ 1.09
VCPKMT-203ENST00000484763 COLGALT2Q8IYK4 626 aa21.84■■□□□ 1.09
VCPKMT-203ENST00000484763 CCP110O43303 1012 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 ZSCAN12O43309 604 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 B4GALT3O60512 393 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 TACC1O75410 805 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 B3GAT3O94766 335 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 AARSP49588 968 aaKnown RBP eCLIP21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 ZNF394Q53GI3 561 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 DPH6Q7L8W6 267 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 LIMS2Q7Z4I7 341 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 LRRC43Q8N309 656 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 OLIG1Q8TAK6 271 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 RABGGTAQ92696 567 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 TOP1MTQ969P6 601 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 KCND1Q9NSA2 647 aa21.83■■□□□ 1.09
VCPKMT-203ENST00000484763 A0A087X0T9 212 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 FAM228BP0C875 321 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 TNFAIP3P21580 790 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 CDR2Q01850 454 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 TAF3Q5VWG9 929 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 DCLRE1AQ6PJP8 1040 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 GLYCTKQ8IVS8 523 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 CCAR2Q8N163 923 aaKnown RBP21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 LNX1Q8TBB1 728 aaPredicted RBP21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 WHAMMQ8TF30 809 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 DDX1Q92499 740 aaKnown RBP21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 SENP8Q96LD8 212 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 MRPL45Q9BRJ2 306 aaKnown RBP21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 L1RE1Q9UN81 338 aa21.83■■□□□ 1.08
VCPKMT-203ENST00000484763 DDX3XO00571 662 aaKnown RBP eCLIP21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 CYB561D2O14569 222 aa21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 ZNF263O14978 683 aa21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 DGKIO75912 1065 aa21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 PAEPP09466 180 aa21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 IGFBP6P24592 240 aaPredicted RBP21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 NDST1P52848 882 aa21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 DEFB103AP81534 67 aa21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 CYP27A1Q02318 531 aa21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 C17orf53Q8N3J3 647 aaPredicted RBP21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 SEPT11Q9NVA2 429 aaKnown RBP21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 HMGXB4Q9UGU5 601 aa21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 REXO2Q9Y3B8 237 aaKnown RBP21.82■■□□□ 1.08
VCPKMT-203ENST00000484763 COL4A6Q14031 1691 aa21.81■■□□□ 1.08
VCPKMT-203ENST00000484763 TSC2P49815 1807 aa21.81■■□□□ 1.08
VCPKMT-203ENST00000484763 TMEM189-UBE2V1I3L0A0 370 aa21.81■■□□□ 1.08
VCPKMT-203ENST00000484763 KIF4AO95239 1232 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms