RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 TMC8Q8IU68 726 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 RASSF8Q8NHQ8 419 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 NELL1Q92832 810 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 IRF7Q92985 503 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 ZSWIM3Q96MP5 696 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 IER2Q9BTL4 223 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 DNAJC25Q9H1X3 360 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 SEL1LQ9UBV2 794 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 DSEQ9UL01 958 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 PPEF2O14830 753 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 PPP1R37O75864 691 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 FGF19O95750 216 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 MYL4P12829 197 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 PSMC3P17980 439 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 NT5DC4Q86YG4 428 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 MFSD6LQ8IWD5 586 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 SHKBP1Q8TBC3 707 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 BRD9Q9H8M2 597 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 ZNF334Q9HCZ1 680 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-206ENST00000484733 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 SPATA6Q9NWH7 488 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-206ENST00000484733 FBXO2Q9UK22 296 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-206ENST00000484733 CLIC4Q9Y696 253 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 TSC2P49815 1807 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 MTMR11A4FU01 709 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 SPTLC1O15269 473 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 GAP43P17677 238 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 WEE1P30291 646 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 DUSP4Q13115 394 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 POSTNQ15063 836 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 ADALQ6DHV7 355 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 KCNG4Q8TDN1 519 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 MSANTD3Q96H12 275 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 EPSTI1Q96J88 318 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 CRISPLD1Q9H336 500 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 ZHX3Q9H4I2 956 aa12.42□□□□□ -0.42
SCFD1-206ENST00000484733 AGO2Q9UKV8 859 aaKnown RBP12.42□□□□□ -0.42
SCFD1-206ENST00000484733 ZFHX2Q9C0A1 2572 aaPredicted RBP12.41□□□□□ -0.42
SCFD1-206ENST00000484733 NFICP08651 508 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 ALDH1A3P47895 512 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 SMARCB1Q12824 385 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 RESTQ13127 1097 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 GRM2Q14416 872 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 TEAD2Q15562 447 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 ZC2HC1CQ53FD0 456 aaPredicted RBP12.41□□□□□ -0.42
SCFD1-206ENST00000484733 ARMCX5Q6P1M9 558 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 ZSCAN18Q8TBC5 510 aaPredicted RBP12.41□□□□□ -0.42
SCFD1-206ENST00000484733 FAM212AQ96EL1 285 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 ZCWPW1Q9H0M4 648 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 PRMT8Q9NR22 394 aaPredicted RBP12.41□□□□□ -0.42
SCFD1-206ENST00000484733 PCDHGA2Q9Y5H1 932 aa12.41□□□□□ -0.42
SCFD1-206ENST00000484733 IL18RAPO95256 599 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 CD72P21854 359 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
SCFD1-206ENST00000484733 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 SFR1Q86XK3 245 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 SUMF1Q8NBK3 374 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 C2orf15Q8WU43 125 aaKnown RBP12.4□□□□□ -0.42
SCFD1-206ENST00000484733 PSMG2Q969U7 264 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 DNAJC19Q96DA6 116 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 PGLYRP2Q96PD5 576 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 OBP2AQ9NY56 170 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 EXOC7Q9UPT5 735 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
SCFD1-206ENST00000484733 ZNF263O14978 683 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
SCFD1-206ENST00000484733 LILRB5O75023 590 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 GDI1P31150 447 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 TUFMP49411 452 aaKnown RBP12.4□□□□□ -0.42
SCFD1-206ENST00000484733 ACOT2P49753 483 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 TAF6P49848 677 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 L1TD1Q5T7N2 865 aaKnown RBP12.4□□□□□ -0.42
SCFD1-206ENST00000484733 RRAGBQ5VZM2 374 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 SV2BQ7L1I2 683 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 ITIH5Q86UX2 942 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 METTL23Q86XA0 190 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 ZBTB44Q8NCP5 570 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 INTS4Q96HW7 963 aaKnown RBP12.4□□□□□ -0.42
SCFD1-206ENST00000484733 FAM126AQ9BYI3 521 aaPredicted RBP12.4□□□□□ -0.42
SCFD1-206ENST00000484733 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 USP34Q70CQ2 3546 aa12.4□□□□□ -0.42
SCFD1-206ENST00000484733 MYMKA6NI61 221 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 HEPACAM2A8MVW5 462 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 ARNTLO00327 626 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 CHADO15335 359 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 GJA1P17302 382 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 TXLNAP40222 546 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 VIPR2P41587 438 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 CSTF1Q05048 431 aaKnown RBP12.39□□□□□ -0.43
SCFD1-206ENST00000484733 C1orf228Q6PIY5 440 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 DYMQ7RTS9 669 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 ERMP1Q7Z2K6 904 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 DNAJB7Q7Z6W7 309 aaPredicted RBP12.39□□□□□ -0.43
SCFD1-206ENST00000484733 THEM5Q8N1Q8 247 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 ATAD1Q8NBU5 361 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 ACCSQ96QU6 501 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 TMEM209Q96SK2 561 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 CHRDQ9H2X0 955 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 ZSCAN32Q9NX65 697 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms