RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 OTUD5Q96G74 571 aa8.24□□□□□ -1.09
COL4A5-205ENST00000483338 CDK5RAP3Q96JB5 506 aa8.24□□□□□ -1.09
COL4A5-205ENST00000483338 FAR2Q96K12 515 aa8.24□□□□□ -1.09
COL4A5-205ENST00000483338 DBNDD2Q9BQY9 259 aa8.24□□□□□ -1.09
COL4A5-205ENST00000483338 NPHS2Q9NP85 383 aa8.24□□□□□ -1.09
COL4A5-205ENST00000483338 MTRF1LQ9UGC7 380 aaKnown RBP8.24□□□□□ -1.09
COL4A5-205ENST00000483338 IFT52Q9Y366 437 aa8.24□□□□□ -1.09
COL4A5-205ENST00000483338 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.24□□□□□ -1.09
COL4A5-205ENST00000483338 DISP2A7MBM2 1401 aa8.24□□□□□ -1.09
COL4A5-205ENST00000483338 IGSF1Q8N6C5 1336 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 KRBA1A5PL33 1030 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 TRIM75PA6NK02 468 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 RSPH10B2B2RC85 870 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ACSL3O95573 720 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 RSPH10BP0C881 870 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 MUTP22033 750 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ATP5DP30049 168 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 CETN2P41208 172 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 DRG2P55039 364 aaKnown RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 NR1H2P55055 460 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 GK3PQ14409 553 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 GRIK5Q16478 980 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 SLC18A3Q16572 532 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 TRMT5Q32P41 509 aaKnown RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ZNF829Q3KNS6 432 aaPredicted RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ARSHQ5FYA8 562 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 BTBD8Q5XKL5 378 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ANKRD40Q6AI12 368 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 DNAAF5Q86Y56 855 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 CALML6Q8TD86 181 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 HELQQ8TDG4 1101 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ACMSDQ8TDX5 336 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 GDPD5Q8WTR4 605 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 HES6Q96HZ4 224 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 RANBP9Q96S59 729 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 RNF38Q9H0F5 515 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 PALMDQ9NP74 551 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ARHGEF4Q9NR80 690 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 APPL1Q9UKG1 709 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ABCB11O95342 1321 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 AP3B1O00203 1094 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 MAGEC1O60732 1142 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 CSPG5O95196 566 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 FGFR1P11362 822 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 C21orf59P57076 290 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 RPL26P61254 145 aaKnown RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 SNAPC2Q13487 334 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 SPCS2Q15005 226 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 EDRF1Q3B7T1 1238 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 TNNI3KQ59H18 835 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 EARS2Q5JPH6 523 aaKnown RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 OTOAQ7RTW8 1153 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 MIER3Q7Z3K6 550 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 PEX26Q7Z412 305 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 RALYLQ86SE5 291 aaKnown RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 CPNE9Q8IYJ1 553 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 PYDC1Q8WXC3 89 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 SGF29Q96ES7 293 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 C8orf48Q96LL4 319 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 GCNAQ96QF7 691 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 NAPBQ9H115 298 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 CDH19Q9H159 772 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ZNF696Q9H7X3 374 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 LRRC4BQ9NT99 713 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 TBK1Q9UHD2 729 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 TRPC5Q9UL62 973 aaPredicted RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 EXOC7Q9UPT5 735 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 FPGT-TNNI3KV9GXZ4 949 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ROBO1Q9Y6N7 1651 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ADGRA3Q8IWK6 1321 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 LINC00854A0A1B0GVQ3 168 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ZSCAN5BA6NJL1 495 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 GNPATO15228 680 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 RSL1D1O76021 490 aaKnown RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 CETPP11597 493 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 NR4A1P22736 598 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 NCKAP1LP55160 1127 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 NUP107P57740 925 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 XIAPP98170 497 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 SSRP1Q08945 709 aaKnown RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 SLC9C1Q4G0N8 1177 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 HERC4Q5GLZ8 1057 aaPredicted RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 FAM182BQ5T319 152 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 LVRNQ6Q4G3 990 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 PPM1KQ8N3J5 372 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 Q8N9G6 341 aaPredicted RBP8.23□□□□□ -1.09
COL4A5-205ENST00000483338 IL17REQ8NFR9 667 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 SHKBP1Q8TBC3 707 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 C7orf43Q8WVR3 580 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 HPS1Q92902 700 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 PHF20Q9BVI0 1012 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 GPAMQ9HCL2 828 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 THAP1Q9NVV9 213 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 TMOD2Q9NZR1 351 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 SLC7A8Q9UHI5 535 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 ADAMTS1Q9UHI8 967 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 DCTN4Q9UJW0 460 aa8.23□□□□□ -1.09
COL4A5-205ENST00000483338 KIF1AQ12756 1690 aa8.22□□□□□ -1.09
COL4A5-205ENST00000483338 WDR91A4D1P6 747 aa8.22□□□□□ -1.09
COL4A5-205ENST00000483338 ALOX15BO15296 676 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms