RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ZNF862O60290 1169 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 DNAJC6O75061 913 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 ADSSP30520 456 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 EIF6P56537 245 aaKnown RBP12.47□□□□□ -0.41
VTI1A-205ENST00000483122 KRT72Q14CN4 511 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 P3H1Q32P28 736 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 PARP10Q53GL7 1025 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 CLEC10AQ8IUN9 316 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 VPS37BQ9H9H4 285 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 SLC17A7Q9P2U7 560 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 LAMB2P55268 1798 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 A0A0J9YVX5 310 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 B2RBV5 119 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 FCHO1O14526 889 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 PIAS1O75925 651 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 BCRP11274 1271 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 MAN1A1P33908 653 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 ARL4CP56559 192 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 DLG4P78352 724 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 MAP7Q14244 749 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 MDH1BQ5I0G3 518 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 TTBK2Q6IQ55 1244 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 ACAD11Q709F0 780 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 AMIGO3Q86WK7 504 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 TRIM42Q8IWZ5 723 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 ADGRF4Q8IZF3 695 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 ZCCHC9Q8N567 271 aaKnown RBP12.46□□□□□ -0.41
VTI1A-205ENST00000483122 SLC25A41Q8N5S1 370 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 SMC1BQ8NDV3 1235 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
VTI1A-205ENST00000483122 KLF6Q99612 283 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-205ENST00000483122 KCNQ5Q9NR82 932 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 SENP1Q9P0U3 644 aa12.46□□□□□ -0.41
VTI1A-205ENST00000483122 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-205ENST00000483122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.46□□□□□ -0.42
VTI1A-205ENST00000483122 F8W8V4 182 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 H3BRJ5 948 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 GOLGA8RI6L899 631 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 TMCC1O94876 653 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 HPCAP84074 193 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 R3HDM1Q15032 1099 aaKnown RBP12.46□□□□□ -0.42
VTI1A-205ENST00000483122 LRRC36Q1X8D7 754 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 SFT2D3Q587I9 215 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 GLIS1Q8NBF1 620 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 SHKBP1Q8TBC3 707 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 TCP10LQ8TDR4 215 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 EPS8L1Q8TE68 723 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 MKNK1Q9BUB5 465 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 TSSK1BQ9BXA7 367 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 NMUR2Q9GZQ4 415 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 MANSC1Q9H8J5 431 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 NARFQ9UHQ1 456 aa12.46□□□□□ -0.42
VTI1A-205ENST00000483122 NOCTQ9UK39 431 aaKnown RBP12.46□□□□□ -0.42
VTI1A-205ENST00000483122 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 MAGEC1O60732 1142 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 CCDC166P0CW27 439 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 RPA1P27694 616 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 AP2B1P63010 937 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 EFTUD2Q15029 972 aaKnown RBP eCLIP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 ALYREFQ86V81 257 aaKnown RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 SLC47A2Q86VL8 602 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 PDSS2Q86YH6 399 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 TREML1Q86YW5 311 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 SCUBE1Q8IWY4 988 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 ARHGAP24Q8N264 748 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 MYCT1Q8N699 235 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 RBM15BQ8NDT2 890 aaKnown RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 CCDC110Q8TBZ0 833 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 DDX27Q96GQ7 796 aaKnown RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 PLVAPQ9BX97 442 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 PSTPIP2Q9H939 334 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 FRMD4BQ9Y2L6 1034 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 EMSYQ7Z589 1322 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 F5H6K3 240 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 PIK3CDO00329 1044 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 SOCS7O14512 581 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 ATP9BO43861 1147 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 BANF1O75531 89 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 ENO1P06733 434 aaKnown RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 RALAP11233 206 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 GYS1P13807 737 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 KLRC2P26717 231 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 SLC16A2P36021 539 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 FMO1Q01740 532 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 SFSWAPQ12872 951 aaKnown RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 MSLNQ13421 630 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 HNRNPDQ14103 355 aaKnown RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 SEPT7Q16181 437 aaKnown RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 Q4G0T1 1027 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 ANKS1BQ7Z6G8 1248 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 RASSF3Q86WH2 238 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 CCDC89Q8N998 374 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 BBOF1Q8ND07 529 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 OR6Y1Q8NGX8 325 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms