RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PUS7LQ9H0K6 701 aaKnown RBP4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 MCM8Q9UJA3 840 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 NEU2Q9Y3R4 380 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PRKAB1Q9Y478 270 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PCDHB1Q9Y5F3 818 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PCDHGA9Q9Y5G4 932 aaKnown RBP4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PCDHGA8Q9Y5G5 932 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PCDHGA7Q9Y5G6 932 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PCDHGA6Q9Y5G7 932 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PCDHGA3Q9Y5H0 932 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 WIPF3A6NGB9 483 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 E9PLN8 166 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 XPOTO43592 962 aaKnown RBP4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 SGTAO43765 313 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 WT1P19544 449 aaPredicted RBP4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 EXOSC10Q01780 885 aaKnown RBP4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 KIF23Q02241 960 aaPredicted RBP4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 TLE1Q04724 770 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 RAB39AQ14964 217 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 ABCB5Q2M3G0 1257 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 TAPT1Q6NXT6 567 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 MICALCLQ6ZW33 695 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 TMPRSS9Q7Z410 1059 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 B3GALNT2Q8NCR0 500 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 ANKS1AQ92625 1134 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 DPF1Q92782 380 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 VKORC1Q9BQB6 163 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 KMT5AQ9NQR1 393 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 ADAM21Q9UKJ8 722 aa4.16□□□□□ -1.74
LAPTM4A-202ENST00000483117 WDR27A2RRH5 827 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 KLHL33A6NCF5 533 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 MYBL2P10244 700 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 ITPKBP27987 946 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 NPTX2P47972 431 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 PIGFQ07326 219 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 HLXQ14774 488 aaPredicted RBP4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 EPHA10Q5JZY3 1008 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 EGFLAMQ63HQ2 1017 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 SLC30A10Q6XR72 485 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 NECAB2Q7Z6G3 386 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 RASAL3Q86YV0 1011 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 COA7Q96BR5 231 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 TRIB1Q96RU8 372 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 SMOQ99835 787 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 VRK1Q99986 396 aaPredicted RBP4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 SERPINB13Q9UIV8 391 aa4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.15□□□□□ -1.75
LAPTM4A-202ENST00000483117 F2RL2O00254 374 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 POLRMTO00411 1230 aaKnown RBP4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 ERBB2P04626 1255 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 RHOP08100 348 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 POU6F2P78424 691 aaPredicted RBP4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 SNAPC2Q13487 334 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 PCBP2Q15366 365 aaKnown RBP eCLIP4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 PPP4R3AQ6IN85 833 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 BHLHA9Q7RTU4 235 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 AOPEPQ8N6M6 819 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 SMG7Q92540 1137 aaKnown RBP4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 TEKT5Q96M29 485 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 ZNF778Q96MU6 729 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 HAPLN3Q96S86 360 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 CCDC8Q9H0W5 538 aaPredicted RBP4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 SMOC2Q9H3U7 446 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 MRPS18AQ9NVS2 196 aaKnown RBP4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 CALCOCO1Q9P1Z2 691 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 TRHDEQ9UKU6 1024 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 ATP8A1Q9Y2Q0 1164 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 NR2E3Q9Y5X4 410 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 WNT6Q9Y6F9 365 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 AOX1Q06278 1338 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 ADGRA2Q96PE1 1338 aa4.14□□□□□ -1.75
LAPTM4A-202ENST00000483117 A0A0B4J269 797 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 LOC105371045A0A1W2PR82 267 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 ZNF785A8K8V0 405 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 E7ENX8 843 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 F5H697 171 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 FZD9O00144 591 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 MALP21145 153 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 LPOP22079 712 aaPredicted RBP4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 ZNF81P51508 661 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 NXPH1P58417 271 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 PSMC1P62191 440 aaKnown RBP4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 TAP2Q03519 686 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 ITIH3Q06033 890 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 TUBB3Q13509 450 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 MTMR1Q13613 665 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 KHDC1Q4VXA5 237 aaKnown RBP4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 CCDC93Q567U6 631 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 SYDE2Q5VT97 1194 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 PTF1AQ7RTS3 328 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 FAM9AQ8IZU1 332 aaPredicted RBP4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 CAMKK1Q8N5S9 505 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 POC1BQ8TC44 478 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 HASPINQ8TF76 798 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 SCARB1Q8WTV0 552 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 KLC4Q9NSK0 619 aa4.13□□□□□ -1.75
LAPTM4A-202ENST00000483117 WDR91A4D1P6 747 aa4.12□□□□□ -1.75
LAPTM4A-202ENST00000483117 LRRC14BA6NHZ5 514 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms