RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 MEA1Q16626 185 aa16.09■□□□□ 0.17
PHGDH-205ENST00000482968 PSRC1Q6PGN9 363 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-205ENST00000482968 DCLRE1AQ6PJP8 1040 aa16.09■□□□□ 0.17
PHGDH-205ENST00000482968 TMEM270Q6UE05 265 aa16.09■□□□□ 0.17
PHGDH-205ENST00000482968 CCDC112Q8NEF3 446 aa16.09■□□□□ 0.17
PHGDH-205ENST00000482968 HASPINQ8TF76 798 aa16.09■□□□□ 0.17
PHGDH-205ENST00000482968 FAXDC2Q96IV6 333 aa16.09■□□□□ 0.17
PHGDH-205ENST00000482968 MRPL9Q9BYD2 267 aaKnown RBP16.09■□□□□ 0.17
PHGDH-205ENST00000482968 CXXC1Q9P0U4 656 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-205ENST00000482968 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.09■□□□□ 0.172e-6■■■■■ 31.1
PHGDH-205ENST00000482968 SOWAHDA6NJG2 315 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 F8W810 466 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 NRDCO43847 1150 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 ALDH2P05091 517 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 SERPING1P05155 500 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 SOWAHAQ2M3V2 549 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 ZNF394Q53GI3 561 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 TDRD12Q587J7 1177 aaKnown RBP16.08■□□□□ 0.17
PHGDH-205ENST00000482968 HGSNATQ68CP4 663 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 CYP26C1Q6V0L0 522 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 TMTC1Q8IUR5 882 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 HAUS4Q9H6D7 363 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 CYP3A43Q9HB55 503 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 ACP6Q9NPH0 428 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 GDAP2Q9NXN4 497 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 ARHGAP20Q9P2F6 1191 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 NR2E3Q9Y5X4 410 aa16.08■□□□□ 0.17
PHGDH-205ENST00000482968 CYB561D2O14569 222 aa16.08■□□□□ 0.16
PHGDH-205ENST00000482968 DYNC1I1O14576 645 aa16.08■□□□□ 0.16
PHGDH-205ENST00000482968 HUS1O60921 280 aa16.08■□□□□ 0.16
PHGDH-205ENST00000482968 CCDC172P0C7W6 258 aa16.08■□□□□ 0.16
PHGDH-205ENST00000482968 FECHP22830 423 aa16.08■□□□□ 0.16
PHGDH-205ENST00000482968 YWHAEP62258 255 aaKnown RBP16.08■□□□□ 0.16
PHGDH-205ENST00000482968 DSTYKQ6XUX3 929 aa16.08■□□□□ 0.16
PHGDH-205ENST00000482968 FMNL3Q8IVF7 1028 aa16.08■□□□□ 0.16
PHGDH-205ENST00000482968 UBR7Q8N806 425 aa16.08■□□□□ 0.16
PHGDH-205ENST00000482968 SENP8Q96LD8 212 aa16.08■□□□□ 0.16
PHGDH-205ENST00000482968 NHEJ1Q9H9Q4 299 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-205ENST00000482968 PRG3Q9Y2Y8 225 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-205ENST00000482968 I3L4J1 428 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 NRP1O14786 923 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 KIF4AO95239 1232 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 CALCAP01258 141 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 ITGB1P05556 798 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 BRCC3P46736 316 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 CDK17Q00537 523 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 MTF1Q14872 753 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 TIGD5Q53EQ6 642 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 CD300LGQ6UXG3 332 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 SLC47A2Q86VL8 602 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 LRRC43Q8N309 656 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 RBBP8NLQ8NC74 664 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-205ENST00000482968 APPL2Q8NEU8 664 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 RSPH1Q8WYR4 309 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 ZNF689Q96CS4 500 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-205ENST00000482968 MRPL45Q9BRJ2 306 aaKnown RBP16.07■□□□□ 0.16
PHGDH-205ENST00000482968 FAN1Q9Y2M0 1017 aa16.07■□□□□ 0.16
PHGDH-205ENST00000482968 PTPRSQ13332 1948 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 NT5C1B-RDH14C9J2C7 533 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 EIF4A3P38919 411 aaKnown RBP16.06■□□□□ 0.16
PHGDH-205ENST00000482968 PBX3P40426 434 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 PRKCIP41743 596 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 PTK2Q05397 1052 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 CCDC42Q96M95 316 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 L1RE1Q9UN81 338 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 CNTN6Q9UQ52 1028 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 BZW2Q9Y6E2 419 aaKnown RBP16.06■□□□□ 0.16
PHGDH-205ENST00000482968 SLC4A7Q9Y6M7 1214 aa16.06■□□□□ 0.16
PHGDH-205ENST00000482968 TADA2AO75478 443 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 SLC11A1P49279 550 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 ORC1Q13415 861 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 BTG3Q14201 252 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-205ENST00000482968 SPOUT1Q5T280 376 aaKnown RBP16.05■□□□□ 0.16
PHGDH-205ENST00000482968 WSCD1Q658N2 575 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 RAD9BQ6WBX8 426 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 ZNF571Q7Z3V5 609 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-205ENST00000482968 OR6B3Q8NGW1 331 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.05■□□□□ 0.16
PHGDH-205ENST00000482968 DEF6Q9H4E7 631 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 HMGXB4Q9UGU5 601 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 BARX2Q9UMQ3 279 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-205ENST00000482968 TIMM13Q9Y5L4 95 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-205ENST00000482968 ARHGAP6O43182 974 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 CILPO75339 1184 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 GJB5O95377 273 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 GALTP07902 379 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 CYP11B1P15538 503 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 ALDH7A1P49419 539 aaKnown RBP16.05■□□□□ 0.16
PHGDH-205ENST00000482968 AARSP49588 968 aaKnown RBP eCLIP16.05■□□□□ 0.16
PHGDH-205ENST00000482968 NDST1P52848 882 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 BCAR1P56945 870 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 DPH6Q7L8W6 267 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 PDCL2Q8N4E4 241 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 TOP6BLQ8N6T0 577 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 WHAMMQ8TF30 809 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 TWNKQ96RR1 684 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 COLEC11Q9BWP8 271 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms