RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TCP10LQ8TDR4 215 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 TMEM8AQ9HCN3 771 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 TBX20Q9UMR3 447 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 F8VP50 259 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 HLA-DRAP01903 254 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 PHBP35232 272 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 CDO1Q16878 200 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 RNF220Q5VTB9 566 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 SNX30Q5VWJ9 437 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 SWSAP1Q6NVH7 229 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 SH3BP5LQ7L8J4 393 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 OTOAQ7RTW8 1153 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 LMO3Q8TAP4 145 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 SHC3Q92529 594 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 ZNF75CPQ92670 426 aaPredicted RBP13.41□□□□□ -0.26
VPS52-218ENST00000482399 MXRA8Q9BRK3 442 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 ZNF341Q9BYN7 854 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 DMAC2Q9NW81 257 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 IVNS1ABPQ9Y6Y0 642 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 CIB2O75838 187 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 ATP4AP20648 1035 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 KCNA3P22001 575 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 EPHB1P54762 984 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 TMPRSS15P98073 1019 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 GAD2Q05329 585 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 PTK6Q13882 451 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 UGCGQ16739 394 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 CASC4Q6P4E1 433 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 TMEM143Q96AN5 459 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 RMDN3Q96TC7 470 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 TSSK1BQ9BXA7 367 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 MAK16Q9BXY0 300 aaKnown RBP13.41□□□□□ -0.26
VPS52-218ENST00000482399 G3BP2Q9UN86 482 aaKnown RBP13.41□□□□□ -0.26
VPS52-218ENST00000482399 E2F8A0AVK6 867 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 I3L4J1 428 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 ECE2O60344 883 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 ATP5HO75947 161 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 CYP1A2P05177 515 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 CIITAP33076 1130 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 PGM1P36871 562 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 SERPINB4P48594 390 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 KHDC1Q4VXA5 237 aaKnown RBP13.4□□□□□ -0.26
VPS52-218ENST00000482399 CC2D2BQ6DHV5 1058 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 DSTYKQ6XUX3 929 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 PDIK1LQ8N165 341 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 RFWD2Q8NHY2 731 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 UCMAQ8WVF2 138 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 MKL1Q969V6 931 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 CYP4F11Q9HBI6 524 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
VPS52-218ENST00000482399 PCDHB2Q9Y5E7 798 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 DOCK2Q92608 1830 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 B2RBV5 119 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 H7C0C1 242 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 HSPA1LP34931 641 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 ATP5OP48047 213 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 ALDH18A1P54886 795 aaKnown RBP13.4□□□□□ -0.26
VPS52-218ENST00000482399 TFAMQ00059 246 aaKnown RBP13.4□□□□□ -0.26
VPS52-218ENST00000482399 PPP2R5CQ13362 524 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 HHIPL2Q6UWX4 724 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 CDR2LQ86X02 465 aaPredicted RBP13.4□□□□□ -0.26
VPS52-218ENST00000482399 THTPAQ9BU02 230 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 CYP39A1Q9NYL5 469 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 SLC17A7Q9P2U7 560 aa13.4□□□□□ -0.26
VPS52-218ENST00000482399 PSMC3IPQ9P2W1 217 aaPredicted RBP13.4□□□□□ -0.26
VPS52-218ENST00000482399 MAGED2Q9UNF1 606 aaPredicted RBP13.4□□□□□ -0.26
VPS52-218ENST00000482399 MAP3K7O43318 606 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 PROSCO94903 275 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 WEE2P0C1S8 567 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 BGNP21810 368 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 LMNB2Q03252 620 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 TRPC3Q13507 836 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 CGB2Q6NT52 195 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 TRABD2AQ86V40 505 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 SP8Q8IXZ3 490 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 DEPTORQ8TB45 409 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 FBXO41Q8TF61 875 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 VTI1AQ96AJ9 217 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 PAPOLBQ9NRJ5 636 aaKnown RBP13.39□□□□□ -0.27
VPS52-218ENST00000482399 CST8O60676 142 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 PSMA2P25787 234 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 DLGAP5Q15398 846 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 SIX1Q15475 284 aaPredicted RBP13.39□□□□□ -0.27
VPS52-218ENST00000482399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
VPS52-218ENST00000482399 FAM71DQ8N9W8 422 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 RBBP8NLQ8NC74 664 aaPredicted RBP13.39□□□□□ -0.27
VPS52-218ENST00000482399 ZBTB45Q96K62 511 aaPredicted RBP13.39□□□□□ -0.27
VPS52-218ENST00000482399 TAAR1Q96RJ0 339 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 FIZ1Q96SL8 496 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 MANSC1Q9H8J5 431 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 NENFQ9UMX5 172 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 PIK3CDO00329 1044 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 ATP9AO75110 1047 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 STAM2O75886 525 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 ABL2P42684 1182 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 BPIFB4P59827 614 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 CCNG2Q16589 344 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 RNF43Q68DV7 783 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 TTC7BQ86TV6 843 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms