RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	PTGER1	P34995	402 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	SOX10	P56693	466 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	KRTAP10-6	P60371	365 aa	Predicted RBP	4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	SLC10A2	Q12908	348 aa	Predicted RBP	4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	IL10RA	Q13651	578 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	PTPRR	Q15256	657 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	CLNK	Q7Z7G1	428 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	FAXDC2	Q96IV6	333 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	LIMCH1	Q9UPQ0	1083 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	PCDHGA8	Q9Y5G5	932 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	PCDHGA7	Q9Y5G6	932 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	PCDHGA6	Q9Y5G7	932 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	PCDHGA3	Q9Y5H0	932 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	ZNF521	Q96K83	1311 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	TRIM38	O00635	465 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	GRM6	O15303	877 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	XPOT	O43592	962 aa	Known RBP	4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	AGFG2	O95081	481 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	PPP3CB	P16298	524 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	KCNA2	P16389	499 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	KEL	P23276	732 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	CTXN1	P60606	82 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	RPS7	P62081	194 aa	Known RBP	4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	FAM50A	Q14320	339 aa	Known RBP	4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	ABCB5	Q2M3G0	1257 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	FAM153C	Q494X1	144 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	UTP14C	Q5TAP6	766 aa	Known RBP	4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	NSUN7	Q8NE18	718 aa	Known RBP	4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	PGBD1	Q96JS3	809 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	TDP1	Q9NUW8	608 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	SAP30BP	Q9UHR5	308 aa	Known RBP	4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	TRHDE	Q9UKU6	1024 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	PADI4	Q9UM07	663 aa		4.36	□□□□□ -1.71
CCNL1-223	ENST00000481173	KLHL33	A6NCF5	533 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	VWC2L	B2RUY7	222 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	IGSF3	O75054	1194 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	HAUS5	O94927	633 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	WAS	P42768	502 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	GUCY2F	P51841	1108 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	EVA1C	P58658	441 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	ZNF280A	P59817	542 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	MC2R	Q01718	297 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	ITK	Q08881	620 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	C3orf36	Q3SXR2	165 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	PREPL	Q4J6C6	727 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	DACT2	Q5SW24	774 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	MIGA2	Q7L4E1	593 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	ADGRG5	Q8IZF4	528 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	CAMKK1	Q8N5S9	505 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	SEMA6D	Q8NFY4	1073 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	RPL36AL	Q969Q0	106 aa	Known RBP	4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	KRTAP2-2	Q9BYT5	123 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	CTTNBP2NL	Q9P2B4	639 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	SLC45A2	Q9UMX9	530 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	SBNO2	Q9Y2G9	1366 aa		4.35	□□□□□ -1.71
CCNL1-223	ENST00000481173	CCDC154	A6NI56	674 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	HTRA2	O43464	458 aa	Predicted RBP	4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	KATNA1	O75449	491 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	CDK11B	P21127	795 aa	Known RBP	4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	EDNRB	P24530	442 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	MPG	P29372	298 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	CDKN1C	P49918	316 aa	Predicted RBP	4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	TUBA4A	P68366	448 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	CDC42EP1	Q00587	391 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	KIF23	Q02241	960 aa	Predicted RBP	4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	MTMR1	Q13613	665 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	DYRK1A	Q13627	763 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	FHL1	Q13642	323 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	ATP2B3	Q16720	1220 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	FLYWCH1	Q4VC44	716 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	SYDE2	Q5VT97	1194 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	NECAB2	Q7Z6G3	386 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	IFI44	Q8TCB0	444 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	KAT5	Q92993	513 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	HDAC10	Q969S8	669 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	CLPTM1L	Q96KA5	538 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	SERGEF	Q9UGK8	458 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	IPP	Q9Y573	584 aa		4.34	□□□□□ -1.71
CCNL1-223	ENST00000481173	WDR27	A2RRH5	827 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	TOR1B	O14657	336 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	SUN1	O94901	812 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	MTHFD1	P11586	935 aa	Known RBP	4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	EPHB2	P29323	1055 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	SLC16A1	P53985	500 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	PABPC1L	Q4VXU2	614 aa	Known RBP	4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	ZNF66	Q6ZN08	573 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	YTHDF3	Q7Z739	585 aa	Known RBP	4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	B3GALNT2	Q8NCR0	500 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	FBXO41	Q8TF61	875 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	SSH1	Q8WYL5	1049 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	SNX19	Q92543	992 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	MTMR8	Q96EF0	704 aa		4.33	□□□□□ -1.72
CCNL1-223	ENST00000481173	TEKT5	Q96M29	485 aa		4.33	□□□□□ -1.72

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