RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 MYO7AQ13402 2215 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 CACNA1HO95180 2353 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
TRA2B-212ENST00000480461 FSCN2O14926 492 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 XPOTO43592 962 aaKnown RBP13.17□□□□□ -0.3
TRA2B-212ENST00000480461 FGFR1OPO95684 399 aaKnown RBP13.17□□□□□ -0.3
TRA2B-212ENST00000480461 GNA14O95837 355 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 TNNC2P02585 160 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 KRT19P08727 400 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 ATP1A3P13637 1013 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 PPM1AP35813 382 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 ZNF445P59923 1031 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 FOXK2Q01167 660 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 MYL5Q02045 173 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 KRT17Q04695 432 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 DCAF17Q5H9S7 520 aaPredicted RBP13.17□□□□□ -0.3
TRA2B-212ENST00000480461 MIIPQ5JXC2 388 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 RTP2Q5QGT7 225 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 FAM171A1Q5VUB5 890 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 LRSAM1Q6UWE0 723 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 APTXQ7Z2E3 356 aaKnown RBP13.17□□□□□ -0.3
TRA2B-212ENST00000480461 LIMS2Q7Z4I7 341 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 LUZP1Q86V48 1076 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 LMO3Q8TAP4 145 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 PBXIP1Q96AQ6 731 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 TMEM169Q96HH4 297 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 SUSD3Q96L08 255 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 SENP8Q96LD8 212 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 PI4K2AQ9BTU6 479 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 MMRN2Q9H8L6 949 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.17□□□□□ -0.33e-11■■■■□ 26.5
TRA2B-212ENST00000480461 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 LZTS1Q9Y250 596 aa13.17□□□□□ -0.3
TRA2B-212ENST00000480461 TIMM13Q9Y5L4 95 aaPredicted RBP13.17□□□□□ -0.3
TRA2B-212ENST00000480461 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
TRA2B-212ENST00000480461 SPTBN4Q9H254 2564 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 LRRC10BA6NIK2 292 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 KPNA7A9QM74 516 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 KCNJ18B7U540 433 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 M0QZQ0 153 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 CSPG5O95196 566 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 CXCL14O95715 111 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 HLA-DRAP01903 254 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 FGFR3P22607 806 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 TKTP29401 623 aaKnown RBP13.16□□□□□ -0.3
TRA2B-212ENST00000480461 GTF2H1P32780 548 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 FMO5P49326 533 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 AP3M2P53677 418 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 NCOA4Q13772 614 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 MRPL58Q14197 206 aaKnown RBP13.16□□□□□ -0.3
TRA2B-212ENST00000480461 KCNJ12Q14500 433 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 TPD52L1Q16890 204 aaPredicted RBP13.16□□□□□ -0.3
TRA2B-212ENST00000480461 TCP11X2Q5H9J9 407 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 TCERG1LQ5VWI1 586 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 RSPO2Q6UXX9 243 aaPredicted RBP13.16□□□□□ -0.3
TRA2B-212ENST00000480461 GAS2L3Q86XJ1 694 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
TRA2B-212ENST00000480461 LRRC52Q8N7C0 313 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 MRPL43Q8N983 215 aaKnown RBP13.16□□□□□ -0.3
TRA2B-212ENST00000480461 HPDLQ96IR7 371 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 ZBP1Q9H171 429 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
TRA2B-212ENST00000480461 TMEM8AQ9HCN3 771 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 COQ4Q9Y3A0 265 aa13.16□□□□□ -0.3
TRA2B-212ENST00000480461 LINC01565O15544 149 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 ADAM12O43184 909 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 TBC1D4O60343 1298 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 PHACTR2O75167 634 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 SOD2P04179 222 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 CTSAP10619 480 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 GTF2F1P35269 517 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRA2B-212ENST00000480461 DSG1Q02413 1049 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 UBE3AQ05086 875 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 BIRC3Q13489 604 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 SOWAHAQ2M3V2 549 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 KRT39Q6A163 491 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 SPOPLQ6IQ16 392 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 DPY19L2P1Q6NXN4 242 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 PRSS55Q6UWB4 352 aaPredicted RBP13.15□□□□□ -0.3
TRA2B-212ENST00000480461 FBXL6Q8N531 539 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 LNX1Q8TBB1 728 aaPredicted RBP13.15□□□□□ -0.3
TRA2B-212ENST00000480461 TATDN2Q93075 761 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 NAT10Q9H0A0 1025 aaKnown RBP13.15□□□□□ -0.3
TRA2B-212ENST00000480461 LMAN2LQ9H0V9 348 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 SDCBP2Q9H190 292 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 GDAP2Q9NXN4 497 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
TRA2B-212ENST00000480461 CD207Q9UJ71 328 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 POLIQ9UNA4 740 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 NUB1Q9Y5A7 615 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRA2B-212ENST00000480461 SCN1AP35498 2009 aa13.15□□□□□ -0.3
TRA2B-212ENST00000480461 PLXNA4Q9HCM2 1894 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 C2orf71A6NGG8 1288 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 C2CD2LO14523 706 aa13.14□□□□□ -0.31
TRA2B-212ENST00000480461 CYB561D2O14569 222 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms