RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 PCSK4Q6UW60 755 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 UBE3BQ7Z3V4 1068 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 OR2I1PQ8NGU4 316 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 JADE3Q92613 823 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 BOD1Q96IK1 185 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 NEU1Q99519 415 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 MYOCQ99972 504 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 ALOXE3Q9BYJ1 711 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 GSTO2Q9H4Y5 243 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 SLC23A1Q9UHI7 598 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 TRHDEQ9UKU6 1024 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 RUVBL1Q9Y265 456 aaKnown RBP6.88□□□□□ -1.31
COMMD3-212ENST00000479958 IQGAP1P46940 1657 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 PIK3C2GO75747 1445 aa6.88□□□□□ -1.31
COMMD3-212ENST00000479958 SPATA31D1Q6ZQQ2 1576 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 GRID2IPA4D2P6 1211 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 WNT10BO00744 389 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 GPANK1O95872 356 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 MT-CO1P00395 513 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 AMY1AP04745 511 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 BMP5P22003 454 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 CTXN1P60606 82 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 Q6YL49 198 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 CBARPQ8N350 705 aaPredicted RBP6.87□□□□□ -1.31
COMMD3-212ENST00000479958 GALNT9Q9HCQ5 603 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 TESQ9UGI8 421 aaKnown RBP6.87□□□□□ -1.31
COMMD3-212ENST00000479958 MTO1Q9Y2Z2 717 aaKnown RBP6.87□□□□□ -1.31
COMMD3-212ENST00000479958 POLR1AO95602 1720 aaPredicted RBP6.87□□□□□ -1.31
COMMD3-212ENST00000479958 A2ML1A8K2U0 1454 aa6.87□□□□□ -1.31
COMMD3-212ENST00000479958 SCAF11Q99590 1463 aaKnown RBP6.87□□□□□ -1.31
COMMD3-212ENST00000479958 MARCH11A6NNE9 402 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 KIAA0391O15091 583 aaKnown RBP6.86□□□□□ -1.31
COMMD3-212ENST00000479958 SPDEFO95238 335 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 MTHFD1P11586 935 aaKnown RBP6.86□□□□□ -1.31
COMMD3-212ENST00000479958 TGM1P22735 817 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 CCND1P24385 295 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 TP53BP2Q13625 1128 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 ERCC6LQ2NKX8 1250 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 PNMA8AQ86V59 439 aaPredicted RBP6.86□□□□□ -1.31
COMMD3-212ENST00000479958 BEND2Q8NDZ0 799 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 NUP133Q8WUM0 1156 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 MTMR8Q96EF0 704 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 PNKPQ96T60 521 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 ADAM2Q99965 735 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 C11orf54Q9H0W9 315 aaPredicted RBP6.86□□□□□ -1.31
COMMD3-212ENST00000479958 FBXO34Q9NWN3 711 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 ZNHIT2Q9UHR6 403 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 TNRQ92752 1358 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 ADGRB1O14514 1584 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 KIAA1210Q9ULL0 1709 aa6.86□□□□□ -1.31
COMMD3-212ENST00000479958 TCRBV7S2A1N4TA0A589 114 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 ERN1O75460 977 aaKnown RBP6.85□□□□□ -1.31
COMMD3-212ENST00000479958 LMNAP02545 664 aaKnown RBP6.85□□□□□ -1.31
COMMD3-212ENST00000479958 EGR2P11161 476 aaPredicted RBP6.85□□□□□ -1.31
COMMD3-212ENST00000479958 PROZP22891 400 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 KRT85P78386 507 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 ATP8B2P98198 1209 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 MTMR1Q13613 665 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 DACT2Q5SW24 774 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 ZGPATQ8N5A5 531 aaKnown RBP6.85□□□□□ -1.31
COMMD3-212ENST00000479958 PRPF38AQ8NAV1 312 aaKnown RBP6.85□□□□□ -1.31
COMMD3-212ENST00000479958 GPR150Q8NGU9 434 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 ZCRB1Q8TBF4 217 aaKnown RBP6.85□□□□□ -1.31
COMMD3-212ENST00000479958 SLC9A6Q92581 669 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 RNF31Q96EP0 1072 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 MED15Q96RN5 788 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 CRAMP1Q96RY5 1269 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 TMEM74BQ9NUR3 256 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 TBCCD1Q9NVR7 557 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 STK26Q9P289 416 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 SPEF1Q9Y4P9 236 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 PCDHA13Q9Y5I0 950 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 RIMS2Q9UQ26 1411 aa6.85□□□□□ -1.31
COMMD3-212ENST00000479958 SGTAO43765 313 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 NUDT3O95989 172 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 ELANEP08246 267 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 ITGAMP11215 1152 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 FGFR4P22455 802 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 SLC6A2P23975 617 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 CDC42EP1Q00587 391 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 AMPD3Q01432 767 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 ASXL1Q8IXJ9 1541 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 COLGALT2Q8IYK4 626 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 TMX3Q96JJ7 454 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 ZSWIM1Q9BR11 485 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 RIOX1Q9H6W3 641 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 PRKRIP1Q9H875 184 aaPredicted RBP6.84□□□□□ -1.31
COMMD3-212ENST00000479958 SYBUQ9NX95 663 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 KCNE5Q9UJ90 142 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 ZFYVE9O95405 1425 aa6.84□□□□□ -1.31
COMMD3-212ENST00000479958 CCER2I3L3R5 266 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 C5AR1P21730 350 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 CDKN1CP49918 316 aaPredicted RBP6.84□□□□□ -1.32
COMMD3-212ENST00000479958 NANOS3P60323 173 aaKnown RBP6.84□□□□□ -1.32
COMMD3-212ENST00000479958 CXADRP78310 365 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 HSD11B2P80365 405 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 TMF1P82094 1093 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 OCA2Q04671 838 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 ABCB5Q2M3G0 1257 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms