RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 ERP27Q96DN0 273 aa14.95□□□□□ -0.02
CCDC78-210ENST00000478979 CAMKK2Q96RR4 588 aa14.95□□□□□ -0.02
CCDC78-210ENST00000478979 TAOK3Q9H2K8 898 aa14.95□□□□□ -0.02
CCDC78-210ENST00000478979 PHF2O75151 1096 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 RGS20O76081 388 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 MAPK4P31152 587 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 STX2P32856 288 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 JAK3P52333 1124 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 NLRP11P59045 1033 aaKnown RBP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 CCDC15Q0P6D6 951 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 CUL3Q13618 768 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 ZNF394Q53GI3 561 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 MAP4K3Q8IVH8 894 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 SHC3Q92529 594 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 FNBP1Q96RU3 617 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 COL2A1P02458 1487 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 KIAA1217Q5T5P2 1943 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 RRM1P23921 792 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 CCND2P30279 289 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 CYP24A1Q07973 514 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 OR52E8Q6IFG1 317 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 FAM47EQ6ZV65 393 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 APBB1IPQ7Z5R6 666 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 AGGF1Q8N302 714 aaeCLIP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 ENDOVQ8N8Q3 282 aaKnown RBP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 C11orf70Q9BRQ4 267 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 VCXQ9H320 206 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 TMEM8AQ9HCN3 771 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 XPNPEP1Q9NQW7 623 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 PCMTD2Q9NV79 361 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 ASIC3Q9UHC3 531 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 DIS3Q9Y2L1 958 aaKnown RBP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 ENTPD5O75356 428 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 POLGP54098 1239 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 MTFR1Q15390 333 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 ZNF516Q92618 1163 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 ROPN1BQ9BZX4 212 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 ROPN1Q9HAT0 212 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 JPH1Q9HDC5 661 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-210ENST00000478979 CHST7Q9NS84 486 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 PARP2Q9UGN5 583 aa14.94□□□□□ -0.02
CCDC78-210ENST00000478979 BRAFP15056 766 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 EPHB2P29323 1055 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 PIK3CAP42336 1068 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 ACTR2P61160 394 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 CDR2Q01850 454 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 CNTN2Q02246 1040 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 ALCAMQ13740 583 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 FOXB2Q5VYV0 432 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 FAM136AQ96C01 138 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 HERPUD2Q9BSE4 406 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 PICK1Q9NRD5 415 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 C1orf112Q9NSG2 853 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 PTPRJQ12913 1337 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 MAPTP10636 758 aaKnown RBP14.93□□□□□ -0.02
CCDC78-210ENST00000478979 RFX1P22670 979 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 SESN3P58005 492 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 SP2Q02086 613 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
CCDC78-210ENST00000478979 ACVR2BQ13705 512 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 TMEM132BQ14DG7 1078 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 SGO2Q562F6 1265 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 FAM182AQ5T1J6 154 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 FKBP1CQ5VVH2 108 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 VSIG10LQ86VR7 867 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 SLC13A5Q86YT5 568 aaPredicted RBP14.93□□□□□ -0.02
CCDC78-210ENST00000478979 GPD1LQ8N335 351 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 IFT43Q96FT9 208 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 TBC1D10AQ9BXI6 508 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 CDC42EP4Q9H3Q1 356 aaKnown RBP14.93□□□□□ -0.02
CCDC78-210ENST00000478979 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.93□□□□□ -0.02
CCDC78-210ENST00000478979 PCDHA3Q9Y5H8 950 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 ATP8B3O60423 1300 aa14.93□□□□□ -0.02
CCDC78-210ENST00000478979 CHRNA3P32297 505 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 ANGEL2Q5VTE6 544 aaKnown RBP14.92□□□□□ -0.02
CCDC78-210ENST00000478979 C11orf63Q6NUN7 778 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 IRGCQ6NXR0 463 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 TMEM270Q6UE05 265 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 TAS1R3Q7RTX0 852 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 RBBP8NLQ8NC74 664 aaPredicted RBP14.92□□□□□ -0.02
CCDC78-210ENST00000478979 ACSF2Q96CM8 615 aaPredicted RBP14.92□□□□□ -0.02
CCDC78-210ENST00000478979 FGD4Q96M96 766 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 RUNDC3BQ96NL0 473 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCDC78-210ENST00000478979 NMRK1Q9NWW6 199 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 LMCD1Q9NZU5 365 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 PIM2Q9P1W9 311 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 SLC9A2Q9UBY0 812 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 UMODL1Q5DID0 1318 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 MIF4GDA9UHW6 222 aaKnown RBP14.92□□□□□ -0.02
CCDC78-210ENST00000478979 SMAPO00193 183 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 MARK3P27448 753 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 SFNP31947 248 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 COILP38432 576 aaPredicted RBP14.92□□□□□ -0.02
CCDC78-210ENST00000478979 TNFAIP1Q13829 316 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 SETDB1Q15047 1291 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 ZNF449Q6P9G9 518 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 NIPA1Q7RTP0 329 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 ZBTB33Q86T24 672 aa14.92□□□□□ -0.02
CCDC78-210ENST00000478979 RBM41Q96IZ5 413 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms