RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	TRMT13	Q9NUP7	481 aa	Known RBP	10.21	□□□□□ -0.77
ATG7-223	ENST00000478638	HPCAL4	Q9UM19	191 aa		10.21	□□□□□ -0.77
ATG7-223	ENST00000478638	BRCA2	P51587	3418 aa		10.21	□□□□□ -0.78
ATG7-223	ENST00000478638	TCRBV5S1A1T	A0A578	114 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	CCDC66	A2RUB6	948 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	TMCO5B	A8MYB1	307 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638		H3BQF6	201 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	MEFV	O15553	781 aa	Predicted RBP	10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	RAD51C	O43502	376 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	CEP104	O60308	925 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	GLI1	P08151	1106 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	IQCF3	P0C7M6	154 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	CLCN3	P51790	818 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	ADAM17	P78536	824 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	ZNF200	P98182	395 aa	Predicted RBP	10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	FAAP100	Q0VG06	881 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	PDCD11	Q14690	1871 aa	Known RBP	10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	SGSM1	Q2NKQ1	1148 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	MARCH8	Q5T0T0	291 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	PLEKHA7	Q6IQ23	1121 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	NT5DC4	Q86YG4	428 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	FAM126B	Q8IXS8	530 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	IFT20	Q8IY31	132 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	TRAPPC12	Q8WVT3	735 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	KAT6A	Q92794	2004 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	FAM84A	Q96KN4	292 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	NAP1L3	Q99457	506 aa	Predicted RBP	10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	BCO2	Q9BYV7	579 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	NIF3L1	Q9GZT8	377 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	ASB7	Q9H672	318 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	CTTNBP2NL	Q9P2B4	639 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	ANKFY1	Q9P2R3	1169 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	PCDHGC3	Q9UN70	934 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	PCDHA3	Q9Y5H8	950 aa		10.2	□□□□□ -0.78
ATG7-223	ENST00000478638	CIT	O14578	2027 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	UMODL1	Q5DID0	1318 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	TREH	O43280	583 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	SART1	O43290	800 aa	Known RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	HEXIM1	O94992	359 aa	Known RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	LSM8	O95777	96 aa	Known RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	CST3	P01034	146 aa	Predicted RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	CD4	P01730	458 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	SRGAP2C	P0DJJ0	459 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	CYP2C9	P11712	490 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	RAG1	P15918	1043 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	OAS2	P29728	719 aa	Known RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	ECHS1	P30084	290 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	HOXC8	P31273	242 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	MAN1A1	P33908	653 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	USP8	P40818	1118 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	SLC1A1	P43005	524 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	DRG2	P55039	364 aa	Known RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	GSC	P56915	257 aa	Predicted RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	C1QBP	Q07021	282 aa	Known RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	PAK2	Q13177	524 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	PTK7	Q13308	1070 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	BIRC3	Q13489	604 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	BFSP2	Q13515	415 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	CUL1	Q13616	776 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	ZNF568	Q3ZCX4	644 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	TAF3	Q5VWG9	929 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	SPOPL	Q6IQ16	392 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	MTHFD1L	Q6UB35	978 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	RSPH3	Q86UC2	560 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	RHPN2	Q8IUC4	686 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	C12orf50	Q8NA57	414 aa	Predicted RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	C1orf131	Q8NDD1	294 aa	Known RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	WHAMM	Q8TF30	809 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	ZNF653	Q96CK0	615 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	RNPC3	Q96LT9	517 aa	Known RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	KRT12	Q99456	494 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	SH3GL2	Q99962	352 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	NUP85	Q9BW27	656 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	ZNF518B	Q9C0D4	1074 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	ACBD3	Q9H3P7	528 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	PDZD7	Q9H5P4	517 aa		10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.19	□□□□□ -0.78
ATG7-223	ENST00000478638	FAM187A	A6NFU0	413 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	AGPS	O00116	658 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	KIAA0355	O15063	1070 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	B4GALT5	O43286	388 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	KRT5	P13647	590 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	SYN1	P17600	705 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	COMT	P21964	271 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	MMP8	P22894	467 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	TMOD1	P28289	359 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	ATIC	P31939	592 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	MYL6	P60660	151 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	CDC42EP1	Q00587	391 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	GPS2	Q13227	327 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	SIX1	Q15475	284 aa	Predicted RBP	10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	TERF2	Q15554	542 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	SCARA3	Q6AZY7	606 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	TAF2	Q6P1X5	1199 aa		10.18	□□□□□ -0.78
ATG7-223	ENST00000478638	KIAA0319L	Q8IZA0	1049 aa		10.18	□□□□□ -0.78

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