RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SERTAD1Q9UHV2 236 aa15.83■□□□□ 0.12
USP11-207ENST00000478596 NRG2O14511 850 aaPredicted RBP15.82■□□□□ 0.12
USP11-207ENST00000478596 ZBTB39O15060 712 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 TBCAO75347 108 aaKnown RBP15.82■□□□□ 0.12
USP11-207ENST00000478596 ZNF202O95125 648 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 HOXC13P31276 330 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 RFC5P40937 340 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 AFMP43652 599 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 RARRES1P49788 294 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 AMPD3Q01432 767 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 GRIK3Q13003 919 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
USP11-207ENST00000478596 EMC2Q15006 297 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 PRSS36Q5K4E3 855 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 ANO5Q75V66 913 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 SYNPOQ8N3V7 929 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 KCTD17Q8N5Z5 321 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 SMARCD2Q92925 531 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 CCDC51Q96ER9 411 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 EIF2AQ9BY44 585 aaKnown RBP15.82■□□□□ 0.12
USP11-207ENST00000478596 LRRC27Q9C0I9 530 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 ZHX3Q9H4I2 956 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 C8orf33Q9H7E9 229 aaPredicted RBP15.82■□□□□ 0.12
USP11-207ENST00000478596 HPSEQ9Y251 543 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 HES2Q9Y543 173 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 COL4A3BPQ9Y5P4 624 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 ZMYM2Q9UBW7 1377 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 SDK1Q7Z5N4 2213 aa15.82■□□□□ 0.12
USP11-207ENST00000478596 ZNF263O14978 683 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 HYAL3O43820 417 aaPredicted RBP15.81■□□□□ 0.12
USP11-207ENST00000478596 CCDC192P0DO97 292 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 PTPN2P17706 415 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 ASIC1P78348 528 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 RAD51AP2Q09MP3 1159 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 PCBP1Q15365 356 aaKnown RBP eCLIP15.81■□□□□ 0.12
USP11-207ENST00000478596 FAM171A1Q5VUB5 890 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 PADI6Q6TGC4 694 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 MAEAQ7L5Y9 396 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 EXOC8Q8IYI6 725 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 RABGGTAQ92696 567 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 MTRQ99707 1265 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 APOL6Q9BWW8 343 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 TNMDQ9H2S6 317 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 TRPV4Q9HBA0 871 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 PPME1Q9Y570 386 aa15.81■□□□□ 0.12
USP11-207ENST00000478596 ADAMTS20P59510 1910 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 LNP1A1A4G5 178 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 WDR27A2RRH5 827 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 FAM221BA6H8Z2 402 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 DGAT1O75907 488 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 SLFN14P0C7P3 912 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 XRCC6P12956 609 aaKnown RBP eCLIP15.8■□□□□ 0.12
USP11-207ENST00000478596 AXLP30530 894 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 OR1D2P34982 312 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 CCINQ13939 588 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 PLK5Q496M5 336 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 C19orf48Q6RUI8 117 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 KRBA2Q6ZNG9 492 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 CEP57Q86XR8 500 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 MFSD6LQ8IWD5 586 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 GRAMD1CQ8IYS0 662 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 FMR1NBQ8N0W7 255 aaPredicted RBP15.8■□□□□ 0.12
USP11-207ENST00000478596 MCPH1Q8NEM0 835 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 SYAP1Q96A49 352 aaPredicted RBP15.8■□□□□ 0.12
USP11-207ENST00000478596 BBC3Q96PG8 261 aaPredicted RBP15.8■□□□□ 0.12
USP11-207ENST00000478596 BLOC1S4Q9NUP1 217 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 CACNA2D2Q9NY47 1150 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 KLK13Q9UKR3 277 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 NAV2Q8IVL1 2488 aa15.8■□□□□ 0.12
USP11-207ENST00000478596 FAM237AA0A1B0GTK4 181 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 ARHGEF37A1IGU5 675 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 ZNF197O14709 1029 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 ACTN4O43707 911 aaKnown RBP15.79■□□□□ 0.12
USP11-207ENST00000478596 FAM13AO94988 1023 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 IDEP14735 1019 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 ELAVL2Q12926 359 aaKnown RBP15.79■□□□□ 0.12
USP11-207ENST00000478596 E2F4Q16254 413 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 KIAA1211LQ6NV74 962 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 NOTUMQ6P988 496 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 DYMQ7RTS9 669 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 HACE1Q8IYU2 909 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 ADAM32Q8TC27 787 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 CSGALNACT1Q8TDX6 532 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 CCDC47Q96A33 483 aaKnown RBP15.79■□□□□ 0.12
USP11-207ENST00000478596 TCEAL4Q96EI5 215 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 PAAF1Q9BRP4 392 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 RUSC1Q9BVN2 902 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 NUP62CLQ9H1M0 184 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 TMEM9BQ9NQ34 198 aa15.79■□□□□ 0.12
USP11-207ENST00000478596 BCLAF3A2AJT9 711 aaKnown RBP15.78■□□□□ 0.12
USP11-207ENST00000478596 MYBPHLA2RUH7 354 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 EXTL3O43909 919 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 TSPAN1O60635 241 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 ERLIN2O94905 339 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 KIF4AO95239 1232 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 CAVIN2O95810 425 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 SRGAP2CP0DJJ0 459 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 SLC12A3P55017 1021 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
USP11-207ENST00000478596 NFKBIBQ15653 356 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms