RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ABCA10Q8WWZ4 1543 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 ZNF608Q9ULD9 1512 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 ADAMTS12P58397 1594 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 RIMBP3CA6NJZ7 1639 aa5.15□□□□□ -1.58
CDC42BPA-212ENST00000478573 RIMBP3BA6NNM3 1639 aa5.15□□□□□ -1.58
CDC42BPA-212ENST00000478573 RIMBP3Q9UFD9 1639 aa5.15□□□□□ -1.58
CDC42BPA-212ENST00000478573 MAGI1Q96QZ7 1491 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-212ENST00000478573 MGST3O14880 152 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 PRSS23O95084 383 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 GCSHP23434 173 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 SIM1P81133 766 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 MRPS35P82673 323 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 UBXN2BQ14CS0 331 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 GJC2Q5T442 439 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 PRR18Q8N4B5 295 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 ACTRT2Q8TDY3 377 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 FBXO41Q8TF61 875 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 ZNF384Q8TF68 577 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 HPS3Q969F9 1004 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 PTCD3Q96EY7 689 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 MYOCQ99972 504 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 GTPBP4Q9BZE4 634 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 C1orf112Q9NSG2 853 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 TMEM140Q9NV12 185 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 FBXO34Q9NWN3 711 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 KCNE5Q9UJ90 142 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 IPPQ9Y573 584 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 ACTL7AQ9Y615 435 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 CUL7Q14999 1698 aa5.15□□□□□ -1.59
CDC42BPA-212ENST00000478573 CLASP1Q7Z460 1538 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 IGLV2-14P01704 120 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 MYL1P05976 194 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 MCAMP43121 646 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 MGAT2Q10469 447 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 MAP9Q49MG5 647 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 ZNF362Q5T0B9 420 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 CYB5RLQ6IPT4 315 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 USP45Q70EL2 814 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 FAM98AQ8NCA5 519 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 CCHCR1Q8TD31 782 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 DIS3LQ8TF46 1054 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 BOD1Q96IK1 185 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 LRGUKQ96M69 825 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 AIFM2Q9BRQ8 373 aa5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 SAP30BPQ9UHR5 308 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-212ENST00000478573 HTRA2O43464 458 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 AP1G1O43747 822 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 DTNBO60941 627 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 ENDOD1O94919 500 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 TRIM27P14373 513 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 GSPT1P15170 499 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 PDCP20941 246 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 EDNRBP24530 442 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 GUCY1A2P33402 732 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 ATXN1P54253 815 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 PPP3CAQ08209 521 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 ZNF267Q14586 743 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 GRM3Q14832 879 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 UAP1L1Q3KQV9 507 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 CHST15Q7LFX5 561 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 CATIPQ7Z7H3 387 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 FAM43AQ8N2R8 423 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 PPM1NQ8N819 430 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 NACC2Q96BF6 587 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 C1GALT1C1Q96EU7 318 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 MVB12AQ96EY5 273 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 MARS2Q96GW9 593 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 NAF1Q96HR8 494 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 MAP3K14Q99558 947 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 ZNF700Q9H0M5 742 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 SLC23A1Q9UHI7 598 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 LIMCH1Q9UPQ0 1083 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 DNM3Q9UQ16 869 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 DMTF1Q9Y222 760 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 ERICH3Q5RHP9 1530 aa5.13□□□□□ -1.59
CDC42BPA-212ENST00000478573 CDHR4A6H8M9 788 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 H3BML4 177 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 TEX33O43247 280 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 PLIN1O60240 522 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 GPR32O75388 356 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 MATN4O95460 622 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 CKBP12277 381 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 ALAS1P13196 640 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 PCSK1P29120 753 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 RARRES1P49788 294 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 UBE4AQ14139 1066 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 CYP2A13Q16696 494 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 GEN1Q17RS7 908 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 ARHGAP29Q52LW3 1261 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 LRCH2Q5VUJ6 765 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 OTUD7BQ6GQQ9 843 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 COLGALT2Q8IYK4 626 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 NRG4Q8WWG1 115 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 HOXB13Q92826 284 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 HEPHQ9BQS7 1158 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 SARGQ9BW04 601 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 KLK15Q9H2R5 256 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 UNKLQ9H9P5 680 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 ALG13Q9NP73 1137 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 DDX21Q9NR30 783 aaKnown RBP eCLIP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms