RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 CRYBB1P53674 252 aaPredicted RBP12.71□□□□□ -0.38
PCCB-214ENST00000478469 PRMT2P55345 433 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 ITGA7Q13683 1181 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 PPP2R3CQ969Q6 453 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 CYFIP2Q96F07 1278 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 SEPT5Q99719 369 aaPredicted RBP12.71□□□□□ -0.38
PCCB-214ENST00000478469 ALDH2P05091 517 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 ASGR1P07306 291 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 SRGAP2BP0DMP2 458 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 EPHB4P54760 987 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 PTPN11Q06124 597 aaPredicted RBP12.7□□□□□ -0.38
PCCB-214ENST00000478469 CEP85LQ5SZL2 805 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 JADE1Q6IE81 842 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 DNAAF3Q8N9W5 541 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 SHISA4Q96DD7 197 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 ARHGAP20Q9P2F6 1191 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 SNX12Q9UMY4 172 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 OPLAHO14841 1288 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 RGS16O15492 202 aaPredicted RBP12.7□□□□□ -0.38
PCCB-214ENST00000478469 ATMINO43313 823 aaPredicted RBP12.7□□□□□ -0.38
PCCB-214ENST00000478469 MMEP08473 750 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 SLC7A5Q01650 507 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 RNPC3Q96LT9 517 aaKnown RBP12.7□□□□□ -0.38
PCCB-214ENST00000478469 YME1L1Q96TA2 773 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 ABI2Q9NYB9 513 aaPredicted RBP12.7□□□□□ -0.38
PCCB-214ENST00000478469 EHD2Q9NZN4 543 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 YWHAGP61981 247 aaKnown RBP eCLIP12.7□□□□□ -0.38
PCCB-214ENST00000478469 EEF1DP3Q658K8 133 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 FAN1Q9Y2M0 1017 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 CCDC151A5D8V7 595 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 ADRB2P07550 413 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 ZNF131P52739 623 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 SLC12A2P55011 1212 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 ELAVL2Q12926 359 aaKnown RBP12.7□□□□□ -0.38
PCCB-214ENST00000478469 EFHC1Q5JVL4 640 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 HASPINQ8TF76 798 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 AIPL1Q9NZN9 384 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 HES2Q9Y543 173 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 ALG6Q9Y672 507 aa12.7□□□□□ -0.38
PCCB-214ENST00000478469 B4GALT5O43286 388 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 CAPN2P17655 700 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 GTF2F1P35269 517 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCCB-214ENST00000478469 LHX1P48742 406 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 CACNB2Q08289 660 aaPredicted RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 CCL14Q16627 93 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 LENG1Q96BZ8 264 aaPredicted RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 ZNF512Q96ME7 567 aaPredicted RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 DDX47Q9H0S4 455 aaKnown RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 DSEQ9UL01 958 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 MYH7P12883 1935 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 C2CD2LO14523 706 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 ARF4P18085 180 aaPredicted RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 DLG4P78352 724 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 APBA1Q02410 837 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 GLE1Q53GS7 698 aaKnown RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 CPLX4Q7Z7G2 160 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 SLC47A2Q86VL8 602 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 FEZF2Q8TBJ5 459 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 PARD6BQ9BYG5 372 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 THAP2Q9H0W7 228 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 OGFRQ9NZT2 677 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 H3BRJ5 948 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 DHX15O43143 795 aaKnown RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 AP1G2O75843 785 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 ACO1P21399 889 aaKnown RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 KCNA10Q16322 511 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 ZNF571Q7Z3V5 609 aaPredicted RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 RYBPQ8N488 228 aaPredicted RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 ZNF518BQ9C0D4 1074 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 BARX2Q9UMQ3 279 aaPredicted RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 GPR25O00155 361 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 RAP1GAPP47736 663 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 APLP1P51693 650 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 SPIRE1Q08AE8 756 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 C12orf56Q8IXR9 622 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 PDIK1LQ8N165 341 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 DPF3Q92784 378 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 TBC1D31Q96DN5 1066 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 SLITRK1Q96PX8 696 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 FGFBP2Q9BYJ0 223 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 ARHGAP28Q9P2N2 729 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 CHORDC1Q9UHD1 332 aaPredicted RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 ST3GAL5Q9UNP4 418 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 ATP8A1Q9Y2Q0 1164 aa12.69□□□□□ -0.38
PCCB-214ENST00000478469 NOC2LQ9Y3T9 749 aaKnown RBP12.69□□□□□ -0.38
PCCB-214ENST00000478469 GRID2IPA4D2P6 1211 aa12.68□□□□□ -0.38
PCCB-214ENST00000478469 TREHO43280 583 aa12.68□□□□□ -0.38
PCCB-214ENST00000478469 SULT1E1P49888 294 aa12.68□□□□□ -0.38
PCCB-214ENST00000478469 GRB14Q14449 540 aa12.68□□□□□ -0.38
PCCB-214ENST00000478469 DCAF6Q58WW2 860 aa12.68□□□□□ -0.38
PCCB-214ENST00000478469 RNF187Q5TA31 235 aaPredicted RBP12.68□□□□□ -0.38
PCCB-214ENST00000478469 TADA2BQ86TJ2 420 aa12.68□□□□□ -0.38
PCCB-214ENST00000478469 FMO2Q99518 471 aa12.68□□□□□ -0.38
PCCB-214ENST00000478469 SRRDQ9UH36 339 aa12.68□□□□□ -0.38
PCCB-214ENST00000478469 COMTP21964 271 aa12.68□□□□□ -0.38
PCCB-214ENST00000478469 NFE2Q16621 373 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms