RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CDY1Q9Y6F8 540 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 TDRD15B5MCY1 1934 aaKnown RBP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 FSD2A1L4K1 749 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 KPNA7A9QM74 516 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 CYB561D2O14569 222 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 CETN3O15182 167 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 TGM5O43548 720 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 PHACTR2O75167 634 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 CLSTN1O94985 981 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 MBD3O95983 291 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 CST3P01034 146 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 EPB41P11171 864 aaKnown RBP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 ODC1P11926 461 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 KRT13P13646 458 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 PPP1R2P41236 205 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 PNPLA4P41247 253 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 VAMP7P51809 220 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 MRPS5P82675 430 aaKnown RBP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 YWHAHQ04917 246 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 LRRC63Q05C16 580 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 PAK1Q13153 545 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 BIRC3Q13489 604 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 LEXMQ3ZCV2 418 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 CTXN3Q4LDR2 81 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 C1orf220Q5T0J3 134 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 TDRD10Q5VZ19 366 aaKnown RBP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 ZNF280DQ6N043 979 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 ANKRD54Q6NXT1 300 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 PDXDC1Q6P996 788 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 SYCE2Q6PIF2 218 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 GPR65Q8IYL9 337 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 LRRC52Q8N7C0 313 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 ATXN2LQ8WWM7 1075 aaKnown RBP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 KHSRPQ92945 711 aaKnown RBP eCLIP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 ELMO3Q96BJ8 720 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 BORCS6Q96GS4 357 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 HPDLQ96IR7 371 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 MSLNLQ96KJ4 702 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 ASB2Q96Q27 587 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 HS3ST6Q96QI5 342 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 DUSP9Q99956 384 aaKnown RBP11.06□□□□□ -0.64
HDAC6-222ENST00000478095 MAN1C1Q9NR34 630 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 CD207Q9UJ71 328 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 CDH22Q9UJ99 828 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 FBXL5Q9UKA1 691 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 SNX9Q9Y5X1 595 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 BACE2Q9Y5Z0 518 aa11.06□□□□□ -0.64
HDAC6-222ENST00000478095 H7C4K7 107 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 WEE2P0C1S8 567 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 OR4Q2P0C623 313 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 IL9P15248 144 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 GCLMP48507 274 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 CDR1P51861 262 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 FKBP3Q00688 224 aaKnown RBP11.05□□□□□ -0.64
HDAC6-222ENST00000478095 ROR1Q01973 937 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 TRPC3Q13507 836 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 MRPL58Q14197 206 aaKnown RBP11.05□□□□□ -0.64
HDAC6-222ENST00000478095 AAK1Q2M2I8 961 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 DPCR1Q3MIW9 517 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 DCAF17Q5H9S7 520 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-222ENST00000478095 RARS2Q5T160 578 aaKnown RBP11.05□□□□□ -0.64
HDAC6-222ENST00000478095 WSCD1Q658N2 575 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 OVOS1Q6IE37 1185 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 PTCRAQ6ISU1 281 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-222ENST00000478095 TTI2Q6NXR4 508 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 TMC5Q6UXY8 1006 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 TMEM184AQ6ZMB5 413 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 INTS8Q75QN2 995 aaKnown RBP11.05□□□□□ -0.64
HDAC6-222ENST00000478095 USP37Q86T82 979 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 ZC3H3Q8IXZ2 948 aaKnown RBP11.05□□□□□ -0.64
HDAC6-222ENST00000478095 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.64
HDAC6-222ENST00000478095 L1RE1Q9UN81 338 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 ATG2AQ2TAZ0 1938 aa11.05□□□□□ -0.64
HDAC6-222ENST00000478095 BICDL2A1A5D9 508 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 WDR27A2RRH5 827 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 GRXCR2A6NFK2 248 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 MAPK13O15264 365 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 SLC16A3O15427 465 aaKnown RBP11.04□□□□□ -0.64
HDAC6-222ENST00000478095 TBC1D4O60343 1298 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 RFPL2O75678 378 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 OAZ2O95190 189 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 VNN1O95497 513 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 C4BPAP04003 597 aaKnown RBP11.04□□□□□ -0.64
HDAC6-222ENST00000478095 CPB1P15086 417 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 TYMPP19971 482 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 MYL6P60660 151 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 CLDN10P78369 228 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 PPP3CAQ08209 521 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 MYO1EQ12965 1108 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 SMAD4Q13485 552 aaKnown RBP11.04□□□□□ -0.64
HDAC6-222ENST00000478095 NCOA4Q13772 614 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 RAB33AQ14088 237 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 TCERG1LQ5VWI1 586 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 SLC8B1Q6J4K2 584 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 LILRA6Q6PI73 481 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 SV2AQ7L0J3 742 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 METTL23Q86XA0 190 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 PDCL2Q8N4E4 241 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 SMRP1Q8NCR6 262 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms