RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 FBRSL1Q9HCM7 1045 aaKnown RBP10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 XPNPEP1Q9NQW7 623 aa10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 TMEM74BQ9NUR3 256 aa10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 THG1LQ9NWX6 298 aaKnown RBP10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 OBP2AQ9NY56 170 aa10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 BRPF3Q9ULD4 1205 aa10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 GDAQ9Y2T3 454 aa10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 ASXL3Q9C0F0 2248 aa10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 ATMQ13315 3056 aa10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 COL12A1Q99715 3063 aa10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 ACACAQ13085 2346 aa10.66□□□□□ -0.7
SMARCB1-206ENST00000477836 ARID2Q68CP9 1835 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 ADAMTS9Q9P2N4 1935 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 PRAMEF12O95522 483 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 DRD1P21728 446 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 U2AF2P26368 475 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 ADD1P35611 737 aaKnown RBP10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 GALK1P51570 392 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 PSMD2Q13200 908 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 CUL4AQ13619 759 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 RUNX3Q13761 415 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 TRIP6Q15654 476 aaKnown RBP10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 ME3Q16798 604 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 CTXN3Q4LDR2 81 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 GPR158Q5T848 1215 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 TRIM68Q6AZZ1 485 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 RNF19BQ6ZMZ0 732 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 CCDC83Q8IWF9 413 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 C4orf19Q8IY42 314 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 SPRYD3Q8NCJ5 442 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 ADAMTS14Q8WXS8 1223 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 CHFRQ96EP1 664 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 UROC1Q96N76 676 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 CAMK1GQ96NX5 476 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 LXNQ9BS40 222 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 NFKBIZQ9BYH8 718 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 ATXN3LQ9H3M9 355 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 EBF3Q9H4W6 596 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 GKN1Q9NS71 199 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 AFF4Q9UHB7 1163 aaKnown RBP10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 YIPF1Q9Y548 306 aa10.65□□□□□ -0.7
SMARCB1-206ENST00000477836 ATXN2Q99700 1313 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 OTOL1A6NHN0 477 aaPredicted RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 OPHN1O60890 802 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 CFIP05156 583 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 FTH1P19P0C7X4 201 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 CPB1P15086 417 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 GLRA2P23416 452 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 ARL2P36404 184 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 EVCP57679 992 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 STK3Q13188 491 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 HNRNPDQ14103 355 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 MRPL58Q14197 206 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 MAPK6Q16659 721 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 FBXO43Q4G163 708 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 ANO7Q6IWH7 933 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 SLC23A3Q6PIS1 610 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 SYT12Q8IV01 421 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 TMEFF1Q8IYR6 380 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 GTF3C6Q969F1 213 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 ACDQ96AP0 544 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 INTS4Q96HW7 963 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 PPP1R10Q96QC0 940 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 POLR3CQ9BUI4 534 aaPredicted RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 SMG9Q9H0W8 520 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 DNAJC25Q9H1X3 360 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 PDZD7Q9H5P4 517 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 HPS4Q9NQG7 708 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 PRMT7Q9NVM4 692 aaPredicted RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 PCDHB9Q9Y5E1 797 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 ZNF462Q96JM2 2506 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 APC2O95996 2303 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 UNC79Q9P2D8 2635 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 HECTD1Q9ULT8 2610 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 NID2Q14112 1375 aa10.64□□□□□ -0.71
SMARCB1-206ENST00000477836 CYP3A7-CYP3A51PA0A087WV96 503 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 LRRIQ4A6NIV6 560 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 J3QKU1 62 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 TNFRSF10BO14763 440 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 SYN3O14994 580 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 N4BP3O15049 544 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 ATXN7O15265 892 aaPredicted RBP10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 MAP3K13O43283 966 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 PFKFB2O60825 505 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 CYP3A7P24462 503 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 GABRR2P28476 465 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 PTGER3P43115 390 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 RCAN1P53805 252 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 EPHB3P54753 998 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 AMPD2Q01433 879 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 PPP2R5CQ13362 524 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 PLD1Q13393 1074 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 CTTNQ14247 550 aaKnown RBP10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 ARHGAP15Q53QZ3 475 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms