RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 SRRTQ9BXP5 876 aaKnown RBP14.12□□□□□ -0.15
TOP3A-205ENST00000477508 IGFLR1Q9H665 355 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 VRTNQ9H8Y1 702 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 TMEM8AQ9HCN3 771 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 OR6C75A6NL08 312 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 CST3P01034 146 aaPredicted RBP14.11□□□□□ -0.15
TOP3A-205ENST00000477508 P4HA1P13674 534 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 PRKCSHP14314 528 aaPredicted RBP14.11□□□□□ -0.15
TOP3A-205ENST00000477508 HOXB8P17481 243 aaPredicted RBP14.11□□□□□ -0.15
TOP3A-205ENST00000477508 RAB33AQ14088 237 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 AAK1Q2M2I8 961 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 C1orf220Q5T0J3 134 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 TCERG1LQ5VWI1 586 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 TDRD10Q5VZ19 366 aaKnown RBP14.11□□□□□ -0.15
TOP3A-205ENST00000477508 KRT39Q6A163 491 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 OVOS1Q6IE37 1185 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 SLC8B1Q6J4K2 584 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 PRSS55Q6UWB4 352 aaPredicted RBP14.11□□□□□ -0.15
TOP3A-205ENST00000477508 C15orf39Q6ZRI6 1047 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 FAM114A1Q8IWE2 563 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 THEM5Q8N1Q8 247 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 TOP6BLQ8N6T0 577 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 CCDC150Q8NCX0 1101 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 IMPG2Q9BZV3 1241 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 NAT10Q9H0A0 1025 aaKnown RBP14.11□□□□□ -0.15
TOP3A-205ENST00000477508 DZANK1Q9NVP4 752 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 CLDND1Q9NY35 253 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 HCFC2Q9Y5Z7 792 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 VWA8A3KMH1 1905 aa14.11□□□□□ -0.15
TOP3A-205ENST00000477508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-205ENST00000477508 TBC1D4O60343 1298 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 N4BP1O75113 896 aaKnown RBP14.1□□□□□ -0.15
TOP3A-205ENST00000477508 GLUD1P00367 558 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 TRIM49P0CI25 452 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 TRIM49CP0CI26 452 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 GCLMP48507 274 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 MXI1P50539 228 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 CLCN4P51793 760 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 PPP3CAQ08209 521 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 CETN1Q12798 172 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 KCNC3Q14003 757 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 CTXN3Q4LDR2 81 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 DCAF17Q5H9S7 520 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-205ENST00000477508 RTL10Q7L3V2 364 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 TMEM130Q8N3G9 435 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 ENOX1Q8TC92 643 aaKnown RBP14.1□□□□□ -0.15
TOP3A-205ENST00000477508 SLC22A17Q8WUG5 538 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 FAXDC2Q96IV6 333 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 CLSTN3Q9BQT9 956 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 PLEKHA4Q9H4M7 779 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 THAP9Q9H5L6 903 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 UBE2ZQ9H832 354 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-205ENST00000477508 MAFFQ9ULX9 164 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 SNX9Q9Y5X1 595 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 COL6A3P12111 3177 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 BRWD1Q9NSI6 2320 aa14.1□□□□□ -0.15
TOP3A-205ENST00000477508 PMM2O15305 246 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 OR1D2P34982 312 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 PIK3CAP42336 1068 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 LHX1P48742 406 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 MYL6P60660 151 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 TNNC1P63316 161 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 TYRO3Q06418 890 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 ZNF699Q32M78 642 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 WDR72Q3MJ13 1102 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 ZNF667Q5HYK9 610 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 TPGS2Q68CL5 300 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 TRIM59Q8IWR1 403 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 SLC35C1Q96A29 364 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 FAM84AQ96KN4 292 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 XYLT2Q9H1B5 865 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 THEGQ9P2T0 379 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 MAGEC2Q9UBF1 373 aaPredicted RBP14.09□□□□□ -0.15
TOP3A-205ENST00000477508 FBXL5Q9UKA1 691 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
TOP3A-205ENST00000477508 CDY1Q9Y6F8 540 aa14.09□□□□□ -0.15
TOP3A-205ENST00000477508 P4HA2O15460 535 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 VNN1O95497 513 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 ASS1P00966 412 aaKnown RBP14.08□□□□□ -0.16
TOP3A-205ENST00000477508 HLA-DRAP01903 254 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 RPL17P18621 184 aaKnown RBP14.08□□□□□ -0.16
TOP3A-205ENST00000477508 GTF2F1P35269 517 aaKnown RBP eCLIP14.08□□□□□ -0.16
TOP3A-205ENST00000477508 MYL7Q01449 175 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 SMARCB1Q12824 385 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 PUS10Q3MIT2 529 aaKnown RBP14.08□□□□□ -0.16
TOP3A-205ENST00000477508 WSCD1Q658N2 575 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 LILRA6Q6PI73 481 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 EP400NLQ6ZTU2 488 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 LIMS2Q7Z4I7 341 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 PALB2Q86YC2 1186 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 PDCL2Q8N4E4 241 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 FBXL13Q8NEE6 735 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 ZNF461Q8TAF7 563 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 ATXN2LQ8WWM7 1075 aaKnown RBP14.08□□□□□ -0.16
TOP3A-205ENST00000477508 MED15Q96RN5 788 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 MMS19Q96T76 1030 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 FAM50BQ9Y247 325 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 COQ4Q9Y3A0 265 aa14.08□□□□□ -0.16
TOP3A-205ENST00000477508 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.08□□□□□ -0.16
TOP3A-205ENST00000477508 EYSQ5T1H1 3165 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms