RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 RPS7P62081 194 aaKnown RBP5.39□□□□□ -1.55
UBR3-209ENST00000477461 MC2RQ01718 297 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 EXOSC10Q01780 885 aaKnown RBP5.39□□□□□ -1.55
UBR3-209ENST00000477461 SRSF4Q08170 494 aaKnown RBP5.39□□□□□ -1.55
UBR3-209ENST00000477461 ZNF844Q08AG5 666 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 C3orf36Q3SXR2 165 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 PREPLQ4J6C6 727 aaPredicted RBP5.39□□□□□ -1.55
UBR3-209ENST00000477461 PABPC1LQ4VXU2 614 aaKnown RBP5.39□□□□□ -1.55
UBR3-209ENST00000477461 SLC30A10Q6XR72 485 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 MIGA2Q7L4E1 593 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 IFI44Q8TCB0 444 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 KAT5Q92993 513 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 NAF1Q96HR8 494 aaKnown RBP5.39□□□□□ -1.55
UBR3-209ENST00000477461 PACSIN1Q9BY11 444 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 PCDH12Q9NPG4 1184 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 CTTNBP2NLQ9P2B4 639 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 NUP160Q12769 1436 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 KIAA0586Q9BVV6 1533 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 K7ESF4 209 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 XPOTO43592 962 aaKnown RBP5.38□□□□□ -1.55
UBR3-209ENST00000477461 CD1AP06126 327 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 WASP42768 502 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 HNRNPMP52272 730 aaKnown RBP eCLIP5.38□□□□□ -1.55
UBR3-209ENST00000477461 CDC42EP1Q00587 391 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 NHLH1Q02575 133 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 DYRK1AQ13627 763 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 PTPROQ16827 1216 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 GADL1Q6ZQY3 521 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 NECAB2Q7Z6G3 386 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 AMIGO2Q86SJ2 522 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 CFAP52Q8N1V2 620 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 C1orf162Q8NEQ5 155 aaPredicted RBP5.38□□□□□ -1.55
UBR3-209ENST00000477461 TMIEQ8NEW7 156 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 DDB2Q92466 427 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 HDAC10Q969S8 669 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 FAXDC2Q96IV6 333 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 CLPTM1LQ96KA5 538 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 SLC29A3Q9BZD2 475 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 RNF7Q9UBF6 113 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 ARPP21Q9UBL0 812 aaPredicted RBP5.38□□□□□ -1.55
UBR3-209ENST00000477461 COL4A3BPQ9Y5P4 624 aa5.38□□□□□ -1.55
UBR3-209ENST00000477461 CCDC154A6NI56 674 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 TRIM75PA6NK02 468 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 ADM5C9JUS6 153 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 PCDHGA12O60330 932 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 SUN1O94901 812 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 SRGNP10124 158 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 MYBL2P10244 700 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 EDNRBP24530 442 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 GRIA3P42263 894 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 KIF23Q02241 960 aaPredicted RBP5.37□□□□□ -1.55
UBR3-209ENST00000477461 FOXF2Q12947 444 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 KIAA0895LQ68EN5 471 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 ZNF788Q6ZQV5 615 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 SRRM1Q8IYB3 904 aaKnown RBP5.37□□□□□ -1.55
UBR3-209ENST00000477461 ADGRG5Q8IZF4 528 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 CBARPQ8N350 705 aaPredicted RBP5.37□□□□□ -1.55
UBR3-209ENST00000477461 SH2D3CQ8N5H7 860 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 PDPRQ8NCN5 879 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 IL17RDQ8NFM7 739 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 MYCBPAPQ8TBZ2 947 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 UROC1Q96N76 676 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 CCDC8Q9H0W5 538 aaPredicted RBP5.37□□□□□ -1.55
UBR3-209ENST00000477461 JKAMPQ9P055 326 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 PCDHGA9Q9Y5G4 932 aaKnown RBP5.37□□□□□ -1.55
UBR3-209ENST00000477461 PCDHGA8Q9Y5G5 932 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 PCDHGA7Q9Y5G6 932 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 PCDHGA6Q9Y5G7 932 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 PCDHGA3Q9Y5H0 932 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 NR2E3Q9Y5X4 410 aa5.37□□□□□ -1.55
UBR3-209ENST00000477461 KLHL33A6NCF5 533 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 DNAJC9-AS1A6NH13 148 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 MPPED1O15442 326 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 HTRA2O43464 458 aaPredicted RBP5.36□□□□□ -1.55
UBR3-209ENST00000477461 ORC4O43929 436 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 SLC43A1O75387 559 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 PPP3CBP16298 524 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 SLC16A1P53985 500 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 ATXN1P54253 815 aaKnown RBP5.36□□□□□ -1.55
UBR3-209ENST00000477461 PROK1P58294 105 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 ABCB5Q2M3G0 1257 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 INAVAQ3KP66 663 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 LRCH2Q5VUJ6 765 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 GRASPQ7Z6J2 395 aaPredicted RBP5.36□□□□□ -1.55
UBR3-209ENST00000477461 SNX19Q92543 992 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 VRK1Q99986 396 aaPredicted RBP5.36□□□□□ -1.55
UBR3-209ENST00000477461 PUS7LQ9H0K6 701 aaKnown RBP5.36□□□□□ -1.55
UBR3-209ENST00000477461 NOP58Q9Y2X3 529 aaKnown RBP5.36□□□□□ -1.55
UBR3-209ENST00000477461 IPPQ9Y573 584 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 PCDHB1Q9Y5F3 818 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 CLIP1P30622 1438 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 CLASP1Q7Z460 1538 aa5.36□□□□□ -1.55
UBR3-209ENST00000477461 UGGT2Q9NYU1 1516 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 CEP162Q5TB80 1403 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 CCDC195A0A1B0GUA6 201 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 MANSC4A6NHS7 340 aaPredicted RBP5.35□□□□□ -1.55
UBR3-209ENST00000477461 LINC00473A8K010 186 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 VWC2LB2RUY7 222 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 ALG1L2C9J202 215 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 CDK11BP21127 795 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms