RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CYP3A5P20815 502 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 LONP1P36776 959 aaKnown RBP12.65□□□□□ -0.38
VARS2-208ENST00000477052 SOX9P48436 509 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 WNT7BP56706 349 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 KCNA1Q09470 495 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 MTAPQ13126 283 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 ADALQ6DHV7 355 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 CENPPQ6IPU0 288 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 SFR1Q86XK3 245 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 SUMF1Q8NBK3 374 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 BEST2Q8NFU1 509 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
VARS2-208ENST00000477052 CLDN23Q96B33 292 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 LPIN3Q9BQK8 851 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 PANK2Q9BZ23 570 aa12.65□□□□□ -0.38
VARS2-208ENST00000477052 UPF2Q9HAU5 1272 aaKnown RBP12.65□□□□□ -0.38
VARS2-208ENST00000477052 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.65□□□□□ -0.38
VARS2-208ENST00000477052 DMXL1Q9Y485 3027 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 ADRB2P07550 413 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 PSMC3P17980 439 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 HOXC13P31276 330 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 EPHB3P54753 998 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 EPHA5P54756 1037 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 GTF2BQ00403 316 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 GPR17Q13304 367 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 TMEM132DQ14C87 1099 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 PTPAQ15257 358 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 SLC39A12Q504Y0 691 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 ZC3H14Q6PJT7 736 aaKnown RBP12.64□□□□□ -0.39
VARS2-208ENST00000477052 GAREM2Q75VX8 874 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 BRAPQ7Z569 592 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 MAP4K3Q8IVH8 894 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 ZNF687Q8N1G0 1237 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 KCTD17Q8N5Z5 321 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 STKLD1Q8NE28 680 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 RMDN1Q96DB5 314 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 ZFYVE19Q96K21 471 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 LRRC3BQ96PB8 259 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 SEPT5Q99719 369 aaPredicted RBP12.64□□□□□ -0.39
VARS2-208ENST00000477052 SMG9Q9H0W8 520 aaKnown RBP12.64□□□□□ -0.39
VARS2-208ENST00000477052 RBM12Q9NTZ6 932 aaKnown RBP12.64□□□□□ -0.39
VARS2-208ENST00000477052 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
VARS2-208ENST00000477052 PIAS3Q9Y6X2 628 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 SCN1AP35498 2009 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 FANCMQ8IYD8 2048 aa12.64□□□□□ -0.39
VARS2-208ENST00000477052 COL4A2P08572 1712 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 MYMKA6NI61 221 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 OR6C75A6NL08 312 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 SLC38A8A6NNN8 435 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 PIRO00625 290 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 CYB561D2O14569 222 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 ZNF263O14978 683 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 KINO60870 393 aaKnown RBP12.63□□□□□ -0.39
VARS2-208ENST00000477052 MICAL2O94851 1124 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 ODC1P11926 461 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 CCNE1P24864 410 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 ADSSP30520 456 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 DDIT3P35638 169 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 ALDH1A3P47895 512 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 MCM2P49736 904 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 CYP4F8P98187 520 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 LPAL2Q16609 132 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 KYAT1Q16773 422 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 WSCD1Q658N2 575 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 CRELD2Q6UXH1 353 aaPredicted RBP12.63□□□□□ -0.39
VARS2-208ENST00000477052 DNAJB7Q7Z6W7 309 aaPredicted RBP12.63□□□□□ -0.39
VARS2-208ENST00000477052 LRRTM3Q86VH5 581 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 EFCAB13Q8IY85 973 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 FAM200AQ8TCP9 573 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 GIPC2Q8TF65 315 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 FAM3CQ92520 227 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 DNASE1L2Q92874 299 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 SAAL1Q96ER3 474 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 PYM1Q9BRP8 204 aaKnown RBP12.63□□□□□ -0.39
VARS2-208ENST00000477052 MKNK1Q9BUB5 465 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 FGFBP2Q9BYJ0 223 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 OSBPL6Q9BZF3 934 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 ATXN3LQ9H3M9 355 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 SEMA4AQ9H3S1 761 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 LMAN1LQ9HAT1 526 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 DPP3Q9NY33 737 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 FBXO2Q9UK22 296 aaPredicted RBP12.63□□□□□ -0.39
VARS2-208ENST00000477052 AGO2Q9UKV8 859 aaKnown RBP12.63□□□□□ -0.39
VARS2-208ENST00000477052 OTOGLQ3ZCN5 2332 aa12.63□□□□□ -0.39
VARS2-208ENST00000477052 TSC2P49815 1807 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 F5P12259 2224 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 A0A087X0B3 334 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 ANO9A1A5B4 782 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 GOLGA8IPA6NC78 632 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 GOLGA8JA6NMD2 632 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 SLC26A4O43511 780 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 XPOTO43592 962 aaKnown RBP12.62□□□□□ -0.39
VARS2-208ENST00000477052 PRAMEF12O95522 483 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 TYMPP19971 482 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 GABRR2P28476 465 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 CASP5P51878 434 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 RESTQ13127 1097 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 MGAT5BQ3V5L5 792 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 WDR44Q5JSH3 913 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms