RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PWP2Q15269 919 aaKnown RBP17.48■□□□□ 0.39
TMEM53-208ENST00000476724 RBBP8NLQ8NC74 664 aaPredicted RBP17.48■□□□□ 0.39
TMEM53-208ENST00000476724 ATL2Q8NHH9 583 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 KATNBL1Q9H079 304 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 ANKFY1Q9P2R3 1169 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 CALCAP01258 141 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 TMOD1P28289 359 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 NCOA4Q13772 614 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 CAPSQ13938 189 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 SURF1Q15526 300 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 IER5Q5VY09 327 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 RGMBQ6NW40 437 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 MAMDC4Q6UXC1 1216 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 PLEKHH3Q7Z736 793 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 DPP9Q86TI2 863 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 BRSK2Q8IWQ3 736 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 KATNAL2Q8IYT4 538 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 C1orf54Q8WWF1 131 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 TCP11Q8WWU5 503 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 SNF8Q96H20 258 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 DCLK3Q9C098 648 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.48■□□□□ 0.39
TMEM53-208ENST00000476724 ANKRD65E5RJM6 399 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 LGR5O75473 907 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 SNAI1O95863 264 aaPredicted RBP17.47■□□□□ 0.39
TMEM53-208ENST00000476724 CETN2P41208 172 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 MAMLD1Q13495 774 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 WDR49Q8IV35 697 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 OTUD6BQ8N6M0 293 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 NPLOC4Q8TAT6 608 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 MAML3Q96JK9 1138 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 FAM84AQ96KN4 292 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 MRPL4Q9BYD3 311 aaKnown RBP17.47■□□□□ 0.39
TMEM53-208ENST00000476724 AZI2Q9H6S1 392 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 PARVAQ9NVD7 372 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 NUB1Q9Y5A7 615 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 UMODL1Q5DID0 1318 aa17.47■□□□□ 0.39
TMEM53-208ENST00000476724 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.46■□□□□ 0.39
TMEM53-208ENST00000476724 DCDC2CA8MYV0 355 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 THAP12O43422 761 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 TOM1L1O75674 476 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 ADCYAP1R1P41586 468 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 MMP13P45452 471 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 ARHGAP1Q07960 439 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 CCNG2Q16589 344 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 EXD1Q8NHP7 514 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 RAPGEF5Q92565 580 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 C11orf70Q9BRQ4 267 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 TRIM7Q9C029 511 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 ASIC3Q9UHC3 531 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 IP6K2Q9UHH9 426 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 TLDC2A0PJX2 215 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 C5orf60A6NFR6 353 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 MANSC4A6NHS7 340 aaPredicted RBP17.46■□□□□ 0.39
TMEM53-208ENST00000476724 RASGRF2O14827 1237 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 KLF1Q13351 362 aaPredicted RBP17.46■□□□□ 0.39
TMEM53-208ENST00000476724 DRP2Q13474 957 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 MXD4Q14582 209 aaPredicted RBP17.46■□□□□ 0.39
TMEM53-208ENST00000476724 TAF1CQ15572 869 aaPredicted RBP17.46■□□□□ 0.39
TMEM53-208ENST00000476724 ZNF568Q3ZCX4 644 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 TNFAIP8L3Q5GJ75 292 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 ZBTB41Q5SVQ8 909 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 ERMARDQ5T6L9 678 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 MFSD5Q6N075 450 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 RHBDF2Q6PJF5 856 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 OR5B17Q8NGF7 314 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 FEZF2Q8TBJ5 459 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 BBXQ8WY36 941 aaPredicted RBP17.46■□□□□ 0.39
TMEM53-208ENST00000476724 CHST7Q9NS84 486 aa17.46■□□□□ 0.39
TMEM53-208ENST00000476724 ZNF132P52740 706 aa17.45■□□□□ 0.38
TMEM53-208ENST00000476724 SNX1Q13596 522 aa17.45■□□□□ 0.38
TMEM53-208ENST00000476724 ZNF467Q7Z7K2 595 aaPredicted RBP17.45■□□□□ 0.38
TMEM53-208ENST00000476724 UBR7Q8N806 425 aa17.45■□□□□ 0.38
TMEM53-208ENST00000476724 PRPF31Q8WWY3 499 aaKnown RBP17.45■□□□□ 0.38
TMEM53-208ENST00000476724 ZNF606Q8WXB4 792 aa17.45■□□□□ 0.38
TMEM53-208ENST00000476724 TRAIPQ9BWF2 469 aa17.45■□□□□ 0.38
TMEM53-208ENST00000476724 LRRC4CQ9HCJ2 640 aa17.45■□□□□ 0.38
TMEM53-208ENST00000476724 VTA1Q9NP79 307 aa17.45■□□□□ 0.38
TMEM53-208ENST00000476724 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 ZBTB42B2RXF5 422 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 TLR3O15455 904 aaKnown RBP17.44■□□□□ 0.38
TMEM53-208ENST00000476724 MSCO60682 206 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 LSM8O95777 96 aaKnown RBP17.44■□□□□ 0.38
TMEM53-208ENST00000476724 ASS1P00966 412 aaKnown RBP17.44■□□□□ 0.38
TMEM53-208ENST00000476724 SLC10A3P09131 477 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 FGFR4P22455 802 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 IVDP26440 423 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 LMNB2Q03252 620 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 PLCB4Q15147 1175 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 SGSM1Q2NKQ1 1148 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 TAOK1Q7L7X3 1001 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 CCDC50Q8IVM0 306 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 SCLT1Q96NL6 688 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 XPO6Q96QU8 1125 aaKnown RBP17.44■□□□□ 0.38
TMEM53-208ENST00000476724 ZNF518BQ9C0D4 1074 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 C2orf40Q9H1Z8 148 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 ZNF236Q9UL36 1845 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 RBM47A0AV96 593 aaKnown RBP17.44■□□□□ 0.38
TMEM53-208ENST00000476724 FAM155AB1AL88 458 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms