RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 MEIS3P2A8K0S8 358 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 B4GALT4O60513 344 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 CST3P01034 146 aaPredicted RBP12.86□□□□□ -0.35
XPC-205ENST00000476581 PECAM1P16284 738 aaPredicted RBP12.86□□□□□ -0.35
XPC-205ENST00000476581 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
XPC-205ENST00000476581 VAV2P52735 878 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 SLC7A5Q01650 507 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 RAPGEF1Q13905 1077 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 PSMD6Q15008 389 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 RNF180Q86T96 592 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 NSMCE1Q8WV22 266 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 CITO14578 2027 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 UMODL1Q5DID0 1318 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 TNNI1P19237 187 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 MXI1P50539 228 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 MCCD1P59942 119 aaPredicted RBP12.86□□□□□ -0.35
XPC-205ENST00000476581 ELF3P78545 371 aaPredicted RBP12.86□□□□□ -0.35
XPC-205ENST00000476581 ZBED6P86452 979 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 POU5F1BQ06416 359 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 SLC9C1Q4G0N8 1177 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 HGSNATQ68CP4 663 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 PDXDC1Q6P996 788 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 BZW1Q7L1Q6 419 aaKnown RBP12.86□□□□□ -0.35
XPC-205ENST00000476581 ZNF410Q86VK4 478 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 PIK3R5Q8WYR1 880 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 LACRTQ9GZZ8 138 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
XPC-205ENST00000476581 AGO3Q9H9G7 860 aaKnown RBP12.86□□□□□ -0.35
XPC-205ENST00000476581 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 C5orf60A6NFR6 353 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 ZNF263O14978 683 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 MAPK13O15264 365 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 OGTO15294 1046 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 NPTXRO95502 500 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 C4BPAP04003 597 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 STAG3L1P0CL83 205 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 THPOP40225 353 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 FIGNQ5HY92 759 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 SLFN12LQ6IEE8 588 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 C15orf39Q6ZRI6 1047 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 CATSPER4Q7RTX7 472 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 NXF3Q9H4D5 531 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 PPANQ9NQ55 473 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 PAK6Q9NQU5 681 aaPredicted RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 BUB1BO60566 1050 aaPredicted RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 NFICP08651 508 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 CCL5P13501 91 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 AKAP5P24588 427 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 CLDN10P78369 228 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 ARHGAP44Q17R89 818 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 CAPRIN2Q6IMN6 1127 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 CACNA2D4Q7Z3S7 1137 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 SPAG5Q96R06 1193 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 GCOM2Q9BZD3 368 aaPredicted RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 RNF208Q9H0X6 261 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 KDM4CQ9H3R0 1056 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 CEP72Q9P209 647 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 C15orf41Q9Y2V0 281 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 A0A1W2PQJ5 194 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 KPNA6O60684 536 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 SMNDC1O75940 238 aaKnown RBP eCLIP12.85□□□□□ -0.35
XPC-205ENST00000476581 CYLC1P35663 651 aaPredicted RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 PEX19P40855 299 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 AFF1P51825 1210 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 JAM2P57087 298 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 RIPK1Q13546 671 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 MEA1Q16626 185 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 TSR1Q2NL82 804 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 SLC10A6Q3KNW5 377 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 BRSK2Q8IWQ3 736 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 SEC16BQ96JE7 1060 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 KREMEN1Q96MU8 473 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 CELF4Q9BZC1 486 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 APOBEC3GQ9HC16 384 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 SNTG2Q9NY99 539 aa12.85□□□□□ -0.35
XPC-205ENST00000476581 CPSF2Q9P2I0 782 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 PIN4Q9Y237 131 aaKnown RBP12.85□□□□□ -0.35
XPC-205ENST00000476581 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 LACTBL1A8MY62 500 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 MNX1P50219 401 aaPredicted RBP12.84□□□□□ -0.35
XPC-205ENST00000476581 LBX1P52954 281 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 MRPS6P82932 125 aaKnown RBP12.84□□□□□ -0.35
XPC-205ENST00000476581 CYP27A1Q02318 531 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 MGAT3Q09327 533 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 TRIM71Q2Q1W2 868 aaKnown RBP12.84□□□□□ -0.35
XPC-205ENST00000476581 IFT20Q8IY31 132 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 PCSK9Q8NBP7 692 aaKnown RBP12.84□□□□□ -0.35
XPC-205ENST00000476581 CCHCR1Q8TD31 782 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 TMC2Q8TDI7 906 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 CCT6BQ92526 530 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 STAMBPL1Q96FJ0 436 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 ZMAT2Q96NC0 199 aaKnown RBP12.84□□□□□ -0.35
XPC-205ENST00000476581 NUP58Q9BVL2 599 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 APOL6Q9BWW8 343 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 SENP6Q9GZR1 1112 aaPredicted RBP12.84□□□□□ -0.35
XPC-205ENST00000476581 TMEM8AQ9HCN3 771 aa12.84□□□□□ -0.35
XPC-205ENST00000476581 UBE2TQ9NPD8 197 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms