RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ADCY7P51828 1080 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 FOSBP53539 338 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 EPHA5P54756 1037 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 UBE2HP62256 183 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 TNK2Q07912 1038 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 SPIRE1Q08AE8 756 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 SLC14A1Q13336 389 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 LY6DQ14210 128 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 TARBP2Q15633 366 aaKnown RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 PSMD5Q16401 504 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 FAM160B1Q5W0V3 765 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 ZNF746Q6NUN9 644 aaPredicted RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 CLEC18BQ6UXF7 455 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 C11orf74Q86VG3 221 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 HDDC3Q8N4P3 179 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 MINDY1Q8N5J2 469 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 PDCD7Q8N8D1 485 aaKnown RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 CLEC18CQ8NCF0 446 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 OLIG1Q8TAK6 271 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 ZSCAN18Q8TBC5 510 aaPredicted RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 BAHD1Q8TBE0 780 aaPredicted RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 SPIRE2Q8WWL2 714 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 PIBF1Q8WXW3 757 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 TTC9Q92623 222 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 CUL5Q93034 780 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 ZFYVE19Q96K21 471 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 SPATA32Q96LK8 384 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 ZFP42Q96MM3 310 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 GAD1Q99259 594 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 NAP1L4Q99733 375 aaKnown RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 SDF4Q9BRK5 362 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 PAAF1Q9BRP4 392 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 TTPALQ9BTX7 342 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 GCOM2Q9BZD3 368 aaPredicted RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 PSTPIP2Q9H939 334 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 IFT122Q9HBG6 1241 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 GJB4Q9NTQ9 266 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 AGPAT5Q9NUQ2 364 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 CACNG4Q9UBN1 327 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 APOBEC2Q9Y235 224 aaKnown RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 SPTBN1Q01082 2364 aaKnown RBP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 OTOL1A6NHN0 477 aaPredicted RBP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 E9PAM4 449 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 M0R2N6 131 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 ZNF197O14709 1029 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 BACH1O14867 736 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 PPP6R2O75170 966 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 ABLIM3O94929 683 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 EGFP01133 1207 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 SERPINF2P08697 491 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 SFPQP23246 707 aaKnown RBP eCLIP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 IGFBP6P24592 240 aaPredicted RBP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 ZNF76P36508 570 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 SCNN1GP51170 649 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 AP3B2Q13367 1082 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 SERINC3Q13530 473 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 SLC39A14Q15043 492 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 STK38Q15208 465 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 SF3A1Q15459 793 aaKnown RBP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 NPY5RQ15761 445 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 MAPK6Q16659 721 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 PKDCCQ504Y2 493 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 USP39Q53GS9 565 aaKnown RBP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 HS6ST3Q8IZP7 471 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 REXO1Q8N1G1 1221 aaKnown RBP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 FRMD1Q8N878 549 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 LEO1Q8WVC0 666 aaPredicted RBP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 NLRP7Q8WX94 980 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 TNFRSF25Q93038 417 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 E2F7Q96AV8 911 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 USP28Q96RU2 1077 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 CORO1BQ9BR76 489 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 PI4K2AQ9BTU6 479 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 LRRC3Q9BY71 257 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 LMBRD1Q9NUN5 540 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 TFIP11Q9UBB9 837 aaKnown RBP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 MTRRQ9UBK8 725 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 SEPT9Q9UHD8 586 aaPredicted RBP7.12□□□□□ -1.27
CLDN4-205ENST00000476494 PCOLCE2Q9UKZ9 415 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 PCDHA6Q9UN73 950 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 PCDHA8Q9Y5H6 950 aa7.12□□□□□ -1.27
CLDN4-205ENST00000476494 MYLKQ15746 1914 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 NUP210Q8TEM1 1887 aaPredicted RBP7.11□□□□□ -1.27
CLDN4-205ENST00000476494 UTP20O75691 2785 aaKnown RBP7.11□□□□□ -1.27
CLDN4-205ENST00000476494 A0A1W2PQ27 194 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 A0A1W2PQ64 194 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 A0A1W2PQD8 194 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 FAM149AA5PLN7 773 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 LAD1O00515 517 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 ARHGAP33O14559 1287 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 SPTLC2O15270 562 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 TRAK2O60296 914 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 KRT10P13645 584 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 GJA1P17302 382 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 ITPKAP23677 461 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 HOXD12P35452 270 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 MLH1P40692 756 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 IL12RB1P42701 662 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms