RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 DDHD2O94830 711 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 MMEP08473 750 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 SYN1P17600 705 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 RFX1P22670 979 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 COL13A1Q5TAT6 717 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-217ENST00000475693 FAM117BQ6P1L5 589 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 MRPL45Q9BRJ2 306 aaKnown RBP19.35■□□□□ 0.69
ATG4B-217ENST00000475693 DUSP10Q9Y6W6 482 aa19.35■□□□□ 0.69
ATG4B-217ENST00000475693 DDX3XO00571 662 aaKnown RBP eCLIP19.34■□□□□ 0.69
ATG4B-217ENST00000475693 ITGB1P05556 798 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 CHRNB2P17787 502 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 PRKCIP41743 596 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 FAM193AP78312 1265 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 REXO1L1PQ8IX06 675 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 UBR7Q8N806 425 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 RBBP8NLQ8NC74 664 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-217ENST00000475693 EPS8L1Q8TE68 723 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 PPP1R13BQ96KQ4 1090 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 PCDHB18PQ96TA0 734 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 PACSIN1Q9BY11 444 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 IRX2Q9BZI1 471 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-217ENST00000475693 L2HGDHQ9H9P8 463 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 LZTFL1Q9NQ48 299 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 CDH23Q9H251 3354 aa19.34■□□□□ 0.69
ATG4B-217ENST00000475693 CYP11B1P15538 503 aa19.33■□□□□ 0.69
ATG4B-217ENST00000475693 LILRA4P59901 499 aa19.33■□□□□ 0.69
ATG4B-217ENST00000475693 RPUSD2Q8IZ73 545 aaKnown RBP19.33■□□□□ 0.69
ATG4B-217ENST00000475693 ZSWIM1Q9BR11 485 aa19.33■□□□□ 0.69
ATG4B-217ENST00000475693 SYT11Q9BT88 431 aa19.33■□□□□ 0.69
ATG4B-217ENST00000475693 FAM53CQ9NYF3 392 aa19.33■□□□□ 0.69
ATG4B-217ENST00000475693 DNAJB4Q9UDY4 337 aa19.33■□□□□ 0.69
ATG4B-217ENST00000475693 PUF60Q9UHX1 559 aaKnown RBP19.33■□□□□ 0.69
ATG4B-217ENST00000475693 NOCTQ9UK39 431 aaKnown RBP19.33■□□□□ 0.69
ATG4B-217ENST00000475693 PCDHB7Q9Y5E2 793 aa19.33■□□□□ 0.69
ATG4B-217ENST00000475693 TIMM13Q9Y5L4 95 aaPredicted RBP19.33■□□□□ 0.69
ATG4B-217ENST00000475693 TANC1Q9C0D5 1861 aa19.33■□□□□ 0.69
ATG4B-217ENST00000475693 SLU7O95391 586 aaKnown RBP19.33■□□□□ 0.68
ATG4B-217ENST00000475693 MAPK8IP2Q13387 824 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-217ENST00000475693 WHAMMQ8TF30 809 aa19.33■□□□□ 0.68
ATG4B-217ENST00000475693 BCO2Q9BYV7 579 aa19.33■□□□□ 0.68
ATG4B-217ENST00000475693 LACRTQ9GZZ8 138 aa19.33■□□□□ 0.68
ATG4B-217ENST00000475693 PODXLO00592 558 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 EOMESO95936 686 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 TBXAS1P24557 533 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-217ENST00000475693 ATICP31939 592 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 PBX3P40426 434 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 TNNC1P63316 161 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 MYO1EQ12965 1108 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 SOWAHAQ2M3V2 549 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 C7orf61Q8IZ16 206 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 AGPAT1Q99943 283 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 TTC3P53804 2025 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 KPNA7A9QM74 516 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 KIAA0355O15063 1070 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 SKIP12755 728 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 CYLC1P35663 651 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-217ENST00000475693 GLB1LQ6UWU2 654 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 ENOSF1Q7L5Y1 443 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 DPH6Q7L8W6 267 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 OTOP2Q7RTS6 562 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 PASD1Q8IV76 773 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 CRIPAKQ8N1N5 446 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 DDX1Q92499 740 aaKnown RBP19.32■□□□□ 0.68
ATG4B-217ENST00000475693 ZNF592Q92610 1267 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 ELOVL4Q9GZR5 314 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 TBC1D13Q9NVG8 400 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 TMEM161AQ9NX61 479 aa19.32■□□□□ 0.68
ATG4B-217ENST00000475693 SSU72P8A0A1W2PR75 194 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 EIF3CLB5ME19 914 aaKnown RBP19.31■□□□□ 0.68
ATG4B-217ENST00000475693 CCP110O43303 1012 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 BRD2P25440 801 aaKnown RBP19.31■□□□□ 0.68
ATG4B-217ENST00000475693 DEFB103AP81534 67 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 UPP1Q16831 310 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 CCDC142Q17RM4 750 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 NOMO2Q5JPE7 1267 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 C16orf59Q7L2K0 433 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 CCDC170Q8IYT3 715 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 TFAP2BQ92481 460 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 TAF4BQ92750 862 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 EIF3CQ99613 913 aaKnown RBP19.31■□□□□ 0.68
ATG4B-217ENST00000475693 VRTNQ9H8Y1 702 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 LRFN2Q9ULH4 789 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 ALPK3Q96L96 1907 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 PDGFRBP09619 1106 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 CYP3A5P20815 502 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 TNFAIP3P21580 790 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 LMO2P25791 158 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 LRPAP1P30533 357 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 BRCC3P46736 316 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 FMO1Q01740 532 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 C2CD6Q53TS8 623 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 CD300LGQ6UXG3 332 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 APBB2Q92870 758 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 BADQ92934 168 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 CASD1Q96PB1 797 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 CHORDC1Q9UHD1 332 aaPredicted RBP19.31■□□□□ 0.68
ATG4B-217ENST00000475693 PCDHA13Q9Y5I0 950 aa19.31■□□□□ 0.68
ATG4B-217ENST00000475693 XPOTO43592 962 aaKnown RBP19.3■□□□□ 0.68
ATG4B-217ENST00000475693 B3GAT3O94766 335 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 CCDC175P0C221 793 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms