RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CLUHO75153 1309 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 ADCY5O95622 1261 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 SERPINC1P01008 464 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 ASGR2P07307 311 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 HNRNPA1P09651 372 aaKnown RBP eCLIP16.9■□□□□ 0.3
CPSF3-203ENST00000475482 MYBP10242 640 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 OR1D2P34982 312 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 AARSP49588 968 aaKnown RBP eCLIP16.9■□□□□ 0.3
CPSF3-203ENST00000475482 STX17P56962 302 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 POU5F1Q01860 360 aaKnown RBP16.9■□□□□ 0.3
CPSF3-203ENST00000475482 MTMR3Q13615 1198 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 CENPPQ6IPU0 288 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.9■□□□□ 0.3
CPSF3-203ENST00000475482 KCNH6Q9H252 994 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 EPS15L1Q9UBC2 864 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 MAGEC2Q9UBF1 373 aaPredicted RBP16.9■□□□□ 0.3
CPSF3-203ENST00000475482 TUBGCP4Q9UGJ1 667 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 UBQLN1Q9UMX0 589 aaKnown RBP16.9■□□□□ 0.3
CPSF3-203ENST00000475482 KMT2EQ8IZD2 1858 aa16.9■□□□□ 0.3
CPSF3-203ENST00000475482 WDFY4Q6ZS81 3184 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 LACTBL1A8MY62 500 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 ANKRD63C9JTQ0 380 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 ABLIM3O94929 683 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 GCNT3O95395 438 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.29
CPSF3-203ENST00000475482 VARS2Q5ST30 1063 aaKnown RBP16.89■□□□□ 0.29
CPSF3-203ENST00000475482 CD302Q8IX05 232 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 HPS3Q969F9 1004 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 THAP9Q9H5L6 903 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 TBC1D7Q9P0N9 293 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 CDY1Q9Y6F8 540 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 CACNA1HO95180 2353 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 SCN1AP35498 2009 aa16.89■□□□□ 0.29
CPSF3-203ENST00000475482 M0QZQ0 153 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 CALUO43852 315 aaPredicted RBP16.88■□□□□ 0.29
CPSF3-203ENST00000475482 C8AP07357 584 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 TPM2P07951 284 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 ADSSP30520 456 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 PLA2G5P39877 138 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 PPP2R3AQ06190 1150 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 BMT2Q1RMZ1 405 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 SLFN12LQ6IEE8 588 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 TTI2Q6NXR4 508 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 TMEM130Q8N3G9 435 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 ZNF461Q8TAF7 563 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 ZNF507Q8TCN5 953 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 PBXIP1Q96AQ6 731 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 KIF12Q96FN5 646 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 MRFAP1L1Q96HT8 127 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 MYADMQ96S97 322 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 PPP1R9BQ96SB3 815 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 MSTO1Q9BUK6 570 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 SMOC2Q9H3U7 446 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 RPF1Q9H9Y2 349 aaKnown RBP16.88■□□□□ 0.29
CPSF3-203ENST00000475482 KCNK12Q9HB15 430 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 IGSF9Q9P2J2 1179 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 NUB1Q9Y5A7 615 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 PIEZO1Q92508 2521 aa16.88■□□□□ 0.29
CPSF3-203ENST00000475482 GOLGA6L6A8MZA4 724 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 TISP43B9A030 160 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 ZNF18P17022 549 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 EEF1GP26641 437 aaKnown RBP16.87■□□□□ 0.29
CPSF3-203ENST00000475482 ZNF75DP51815 510 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 FANCCQ00597 558 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 ROR1Q01973 937 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 KCNA1Q09470 495 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 KNOP1Q1ED39 458 aaKnown RBP16.87■□□□□ 0.29
CPSF3-203ENST00000475482 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 FILIP1LQ4L180 1135 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 LIN9Q5TKA1 542 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 CDKAL1Q5VV42 579 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 ANKRD40Q6AI12 368 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 CRELD2Q6UXH1 353 aaPredicted RBP16.87■□□□□ 0.29
CPSF3-203ENST00000475482 EPM2AIP1Q7L775 607 aaPredicted RBP16.87■□□□□ 0.29
CPSF3-203ENST00000475482 FBXL6Q8N531 539 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 GOLGA5Q8TBA6 731 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 SCFD1Q8WVM8 642 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 IKZF4Q9H2S9 585 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 ASB7Q9H672 318 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 TMEM206Q9H813 350 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 PIDD1Q9HB75 910 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.87■□□□□ 0.29
CPSF3-203ENST00000475482 PCDHB8Q9UN66 801 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 DERAQ9Y315 318 aa16.87■□□□□ 0.29
CPSF3-203ENST00000475482 ARHGEF37A1IGU5 675 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 WDR27A2RRH5 827 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 H7C4K7 107 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 PDXKO00764 312 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 XPOTO43592 962 aaKnown RBP16.86■□□□□ 0.29
CPSF3-203ENST00000475482 OAZ2O95190 189 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 RPL13P26373 211 aaKnown RBP16.86■□□□□ 0.29
CPSF3-203ENST00000475482 CDC25BP30305 580 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 UBASH3AP57075 661 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 FKBP3Q00688 224 aaKnown RBP16.86■□□□□ 0.29
CPSF3-203ENST00000475482 PPM1LQ5SGD2 360 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 SLC7A14Q8TBB6 771 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 PDLIM2Q96JY6 352 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 CEP63Q96MT8 703 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 MED15Q96RN5 788 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms