RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 BEST2Q8NFU1 509 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 ZC3H10Q96K80 434 aaKnown RBP13.56□□□□□ -0.24
TRIM13-207ENST00000474805 TMEM209Q96SK2 561 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 ATXN3LQ9H3M9 355 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 VPS45Q9NRW7 570 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 CNTN3Q9P232 1028 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
TRIM13-207ENST00000474805 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 SLC8A2Q9UPR5 921 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 PCDHGA5Q9Y5G8 931 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 DENND4CQ5VZ89 1909 aa13.56□□□□□ -0.24
TRIM13-207ENST00000474805 LAMA1P25391 3075 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 ABCA7Q8IZY2 2146 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 THADAQ6YHU6 1953 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 CCDC169A6NNP5 214 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 C4orf47A7E2U8 309 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 PFKFB2O60825 505 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 TOP3BO95985 862 aaKnown RBP13.55□□□□□ -0.24
TRIM13-207ENST00000474805 HARSP12081 509 aaKnown RBP13.55□□□□□ -0.24
TRIM13-207ENST00000474805 RPA1P27694 616 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 MCM7P33993 719 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 FOSBP53539 338 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 YWHAHQ04917 246 aaPredicted RBP13.55□□□□□ -0.24
TRIM13-207ENST00000474805 PLD1Q13393 1074 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 PLK5Q496M5 336 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 DNAJB7Q7Z6W7 309 aaPredicted RBP13.55□□□□□ -0.24
TRIM13-207ENST00000474805 BPIFB1Q8TDL5 484 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 WASF1Q92558 559 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 KIFAP3Q92845 792 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 TCHPQ9BT92 498 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 TARS2Q9BW92 718 aaKnown RBP13.55□□□□□ -0.24
TRIM13-207ENST00000474805 DUSP15Q9H1R2 295 aaPredicted RBP13.55□□□□□ -0.24
TRIM13-207ENST00000474805 TUBGCP4Q9UGJ1 667 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 TPCN1Q9ULQ1 816 aa13.55□□□□□ -0.24
TRIM13-207ENST00000474805 AKAP13Q12802 2813 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 SOAT2O75908 522 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 OAZ2O95190 189 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 PRAMEF12O95522 483 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 MCF2P10911 925 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 GABRR2P28476 465 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 ALDH1A3P47895 512 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 PEX3P56589 373 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 ZNF252P-AS1Q0IIN9 211 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 ACAP1Q15027 740 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 ECM1Q16610 540 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 ITPRIPL2Q3MIP1 535 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 SEZ6Q53EL9 994 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 CENPPQ6IPU0 288 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 FSTL4Q6MZW2 842 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
TRIM13-207ENST00000474805 TAS1R3Q7RTX0 852 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 DIS3L2Q8IYB7 885 aaKnown RBP13.54□□□□□ -0.24
TRIM13-207ENST00000474805 TTC9BQ8N6N2 239 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 ERMNQ8TAM6 284 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 ZBTB45Q96K62 511 aaPredicted RBP13.54□□□□□ -0.24
TRIM13-207ENST00000474805 EDEM2Q9BV94 578 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 TMEM121BQ9BXQ6 578 aaPredicted RBP13.54□□□□□ -0.24
TRIM13-207ENST00000474805 MRPL4Q9BYD3 311 aaKnown RBP13.54□□□□□ -0.24
TRIM13-207ENST00000474805 SMG9Q9H0W8 520 aaKnown RBP13.54□□□□□ -0.24
TRIM13-207ENST00000474805 BHMT2Q9H2M3 363 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 GKN1Q9NS71 199 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 OBP2AQ9NY56 170 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 WASF3Q9UPY6 502 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 MYO16Q9Y6X6 1858 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 MYH11P35749 1972 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 SPEGQ15772 3267 aa13.54□□□□□ -0.24
TRIM13-207ENST00000474805 ANKRD11Q6UB99 2663 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-207ENST00000474805 M0QZQ0 153 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 ABLIM1O14639 778 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 DCLK1O15075 740 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 ATG13O75143 517 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 AKAP3O75969 853 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 PROZP22891 400 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 NPTX2P47972 431 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 CYP4F8P98187 520 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 PLCB2Q00722 1185 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 CREB5Q02930 508 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 SPAG1Q07617 926 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 GPR17Q13304 367 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 SLC10A6Q3KNW5 377 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 ARHGAP15Q53QZ3 475 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 TMEM196Q5HYL7 178 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 SH3PXD2AQ5TCZ1 1133 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 CAMKK1Q8N5S9 505 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 ATAD1Q8NBU5 361 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 PSMG2Q969U7 264 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 HHIPQ96QV1 700 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 TMEM134Q9H6X4 195 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 FBRSL1Q9HCM7 1045 aaKnown RBP13.53□□□□□ -0.24
TRIM13-207ENST00000474805 PHLPP2Q6ZVD8 1323 aa13.53□□□□□ -0.24
TRIM13-207ENST00000474805 MTMR11A4FU01 709 aa13.52□□□□□ -0.25
TRIM13-207ENST00000474805 OTOL1A6NHN0 477 aaPredicted RBP13.52□□□□□ -0.25
TRIM13-207ENST00000474805 SRRM3A6NNA2 597 aaPredicted RBP13.52□□□□□ -0.25
TRIM13-207ENST00000474805 RNF40O75150 1001 aa13.52□□□□□ -0.25
TRIM13-207ENST00000474805 CAVIN2O95810 425 aa13.52□□□□□ -0.25
TRIM13-207ENST00000474805 EGFP01133 1207 aa13.52□□□□□ -0.25
TRIM13-207ENST00000474805 MCM2P49736 904 aa13.52□□□□□ -0.25
TRIM13-207ENST00000474805 CDR1P51861 262 aa13.52□□□□□ -0.25
TRIM13-207ENST00000474805 GRSF1Q12849 480 aaKnown RBP eCLIP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms