RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 NXF1Q9UBU9 619 aaKnown RBP10.74□□□□□ -0.69
COL8A1-206ENST00000474648 APEX2Q9UBZ4 518 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 FBXL5Q9UKA1 691 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 DNAJC12Q9UKB3 198 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 YBX2Q9Y2T7 364 aaKnown RBP10.74□□□□□ -0.69
COL8A1-206ENST00000474648 R3HCC1Q9Y3T6 440 aaKnown RBP10.74□□□□□ -0.69
COL8A1-206ENST00000474648 PCDHA11Q9Y5I1 949 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 FHOD1Q9Y613 1164 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 PDE4DIPQ5VU43 2346 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 M0QZQ0 153 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 CYB561D2O14569 222 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 TADA2AO75478 443 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 WEE2P0C1S8 567 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 FAM163BP0C2L3 166 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 LAG3P18627 525 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 BMPR1AP36894 532 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 ALDH7A1P49419 539 aaKnown RBP10.73□□□□□ -0.69
COL8A1-206ENST00000474648 CDH8P55286 799 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 POLR2FP61218 127 aaKnown RBP10.73□□□□□ -0.69
COL8A1-206ENST00000474648 GCNT1Q02742 428 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 CUL2Q13617 745 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 DSG2Q14126 1118 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 SV2CQ496J9 727 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 SPOUT1Q5T280 376 aaKnown RBP10.73□□□□□ -0.69
COL8A1-206ENST00000474648 DPH6Q7L8W6 267 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 TMC6Q7Z403 805 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 SPRED2Q7Z698 418 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 RNF168Q8IYW5 571 aaPredicted RBP10.73□□□□□ -0.69
COL8A1-206ENST00000474648 PPM1KQ8N3J5 372 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 CCDC150Q8NCX0 1101 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 NEK11Q8NG66 645 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 HASPINQ8TF76 798 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 BAP1Q92560 729 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 MARVELD3Q96A59 401 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 ZNF560Q96MR9 790 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 ZNF558Q96NG5 402 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 ARID3AQ99856 593 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 MRPL45Q9BRJ2 306 aaKnown RBP10.73□□□□□ -0.69
COL8A1-206ENST00000474648 NUP58Q9BVL2 599 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 STK33Q9BYT3 514 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 PBX4Q9BYU1 374 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 GPR62Q9BZJ7 368 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 EDEM3Q9BZQ6 932 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 GPR88Q9GZN0 384 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 NIF3L1Q9GZT8 377 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 SMYD3Q9H7B4 428 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 CYP3A43Q9HB55 503 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 ADAM28Q9UKQ2 775 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 L1RE1Q9UN81 338 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 NME7Q9Y5B8 376 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 SNX9Q9Y5X1 595 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 CITO14578 2027 aa10.73□□□□□ -0.69
COL8A1-206ENST00000474648 RANBP2P49792 3224 aaKnown RBP10.73□□□□□ -0.69
COL8A1-206ENST00000474648 RALGAPA2Q2PPJ7 1873 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 TRIP11Q15643 1979 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 A0A1W2PQJ5 194 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 FOXN3O00409 490 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-206ENST00000474648 TACC1O75410 805 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 GYPCP04921 128 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 CYP11A1P05108 521 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 CA3P07451 260 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 TBXAS1P24557 533 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-206ENST00000474648 RAP1GAPP47736 663 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 FXR1P51114 621 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL8A1-206ENST00000474648 MFAP3P55082 362 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 JAM2P57087 298 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 FOXK1P85037 733 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 TAP1Q03518 808 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 MRPL58Q14197 206 aaKnown RBP10.72□□□□□ -0.69
COL8A1-206ENST00000474648 DRAP1Q14919 205 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-206ENST00000474648 WSCD1Q658N2 575 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 DSTYKQ6XUX3 929 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-206ENST00000474648 OSTM1Q86WC4 334 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 PDCL2Q8N4E4 241 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 TOP6BLQ8N6T0 577 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 WHAMMQ8TF30 809 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 CPLX3Q8WVH0 158 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 KBTBD7Q8WVZ9 684 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 SHC3Q92529 594 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 JAKMIP2Q96AA8 810 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 MMS19Q96T76 1030 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 C17orf80Q9BSJ5 609 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 IMPG2Q9BZV3 1241 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 NLRC4Q9NPP4 1024 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 AAASQ9NRG9 546 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 SPG21Q9NZD8 308 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 CEP72Q9P209 647 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 CAPN11Q9UMQ6 739 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 CNTN6Q9UQ52 1028 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 DAAM1Q9Y4D1 1078 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL8A1-206ENST00000474648 TIMM13Q9Y5L4 95 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-206ENST00000474648 PTPRSQ13332 1948 aa10.72□□□□□ -0.69
COL8A1-206ENST00000474648 CARNS1A5YM72 827 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 GABRDO14764 452 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 HUS1O60921 280 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 P4HA1P13674 534 aa10.71□□□□□ -0.69
COL8A1-206ENST00000474648 TRIM21P19474 475 aaKnown RBP10.71□□□□□ -0.69
COL8A1-206ENST00000474648 TYMPP19971 482 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms