RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MEFVO15553 781 aaPredicted RBP16.36■□□□□ 0.21
VARS-223ENST00000474643 SEC24AO95486 1093 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 SLFN14P0C7P3 912 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 PAX3P23760 479 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 EPHB3P54753 998 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 GTF2BQ00403 316 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 MRPL58Q14197 206 aaKnown RBP16.36■□□□□ 0.21
VARS-223ENST00000474643 POSTNQ15063 836 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 MLF2Q15773 248 aaPredicted RBP16.36■□□□□ 0.21
VARS-223ENST00000474643 SLC5A9Q2M3M2 681 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 ZC3H14Q6PJT7 736 aaKnown RBP16.36■□□□□ 0.21
VARS-223ENST00000474643 RNF19BQ6ZMZ0 732 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 ZNF720Q7Z2F6 126 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 LEMD2Q8NC56 503 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 PJA1Q8NG27 643 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 FAM200AQ8TCP9 573 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 HVCN1Q96D96 273 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 BCO2Q9BYV7 579 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 FOXQ1Q9C009 403 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 BLZF1Q9H2G9 400 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 ZFP14Q9HCL3 533 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 USP25Q9UHP3 1055 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 R3HCC1Q9Y3T6 440 aaKnown RBP16.36■□□□□ 0.21
VARS-223ENST00000474643 PCDHB13Q9Y5F0 798 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 MYO15AQ9UKN7 3530 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 CACNA1HO95180 2353 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 M0QZQ0 153 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 ECI2O75521 394 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 NFICP08651 508 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 NBL1P41271 181 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 NDUFA8P51970 172 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 PRKCQQ04759 706 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 ALCAMQ13740 583 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 TAF12Q16514 161 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 SLC44A4Q53GD3 710 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 SPATA1Q5VX52 437 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 GRAMD1CQ8IYS0 662 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 CCDC34Q96HJ3 373 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 ACCSQ96QU6 501 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 FIZ1Q96SL8 496 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 C7orf25Q9BPX7 421 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 ST6GALNAC4Q9H4F1 302 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 BRD9Q9H8M2 597 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 AVENQ9NQS1 362 aaPredicted RBP16.35■□□□□ 0.21
VARS-223ENST00000474643 OLFML3Q9NRN5 406 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 CPSF3Q9UKF6 684 aaKnown RBP16.35■□□□□ 0.21
VARS-223ENST00000474643 DSEQ9UL01 958 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 MRPS17Q9Y2R5 130 aaKnown RBP16.35■□□□□ 0.21
VARS-223ENST00000474643 DERAQ9Y315 318 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 YIPF1Q9Y548 306 aa16.35■□□□□ 0.21
VARS-223ENST00000474643 KANSL1LA0AUZ9 987 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 NCAM2O15394 837 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 TBC1D4O60343 1298 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 OR4Q2P0C623 313 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 CASP1P29466 404 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 TPRG1Q6ZUI0 275 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 YAF2Q8IY57 180 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 THEM5Q8N1Q8 247 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 KCNN1Q92952 543 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 ELSPBP1Q96BH3 223 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 TCEAL4Q96EI5 215 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 SENP8Q96LD8 212 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 GCNAQ96QF7 691 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 HINFPQ9BQA5 517 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 ASB7Q9H672 318 aa16.34■□□□□ 0.21
VARS-223ENST00000474643 ZFHX2Q9C0A1 2572 aaPredicted RBP16.34■□□□□ 0.21
VARS-223ENST00000474643 PDCD11Q14690 1871 aaKnown RBP16.33■□□□□ 0.21
VARS-223ENST00000474643 FRMD3A2A2Y4 597 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 PRR23AA6NEV1 266 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 ANKRD63C9JTQ0 380 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 ACTN4O43707 911 aaKnown RBP16.33■□□□□ 0.2
VARS-223ENST00000474643 OAZ2O95190 189 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 IL18RAPO95256 599 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 TYMPP19971 482 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 TAF6P49848 677 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 STARD6P59095 220 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 LILRA4P59901 499 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 DUSP4Q13115 394 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 CUL4BQ13620 913 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 GRM2Q14416 872 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 VEPH1Q14D04 833 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 ZBTB6Q15916 424 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 SV2CQ496J9 727 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 L1TD1Q5T7N2 865 aaKnown RBP16.33■□□□□ 0.2
VARS-223ENST00000474643 C9orf57Q5W0N0 161 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 SLC39A4Q6P5W5 647 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 ZNF852Q6ZMS4 543 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 UNC13DQ70J99 1090 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 HS6ST3Q8IZP7 471 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 TMEM130Q8N3G9 435 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 CCDC47Q96A33 483 aaKnown RBP16.33■□□□□ 0.2
VARS-223ENST00000474643 PAGE5Q96GU1 130 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 ZNF560Q96MR9 790 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 SEPT5Q99719 369 aaPredicted RBP16.33■□□□□ 0.2
VARS-223ENST00000474643 TRMT61BQ9BVS5 477 aaKnown RBP16.33■□□□□ 0.2
VARS-223ENST00000474643 SPATA6Q9NWH7 488 aaPredicted RBP16.33■□□□□ 0.2
VARS-223ENST00000474643 DPP3Q9NY33 737 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 HPSEQ9Y251 543 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 C2CD2Q9Y426 696 aa16.33■□□□□ 0.2
VARS-223ENST00000474643 FAM170BA6NMN3 283 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms