RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 HNRNPH3P31942 346 aaKnown RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 MLH1P40692 756 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 GATMP50440 423 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 PLCB3Q01970 1234 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 APBA1Q02410 837 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 KRT17Q04695 432 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 LRRC63Q05C16 580 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 KCNMA1Q12791 1236 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 MAN2A1Q16706 1144 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 BMT2Q1RMZ1 405 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 TIGD5Q53EQ6 642 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 ZC2HC1CQ53FD0 456 aaPredicted RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 XKR4Q5GH76 650 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 LRRC55Q6ZSA7 311 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 Q7L0L9 218 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 EPM2AIP1Q7L775 607 aaPredicted RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 CACNA2D4Q7Z3S7 1137 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 NELFCDQ8IXH7 590 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 THNSL1Q8IYQ7 743 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 EHBP1Q8NDI1 1231 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 PPP2R3CQ969Q6 453 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 KIF12Q96FN5 646 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 PSMB7Q99436 277 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 TSG101Q99816 390 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 C17orf80Q9BSJ5 609 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 CRACR2AQ9BSW2 395 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 MSTO1Q9BUK6 570 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 COLEC11Q9BWP8 271 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 APOL6Q9BWW8 343 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 PRDM12Q9H4Q4 367 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 KIAA1586Q9HCI6 787 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 NLRC4Q9NPP4 1024 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 TBC1D13Q9NVG8 400 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 SPG21Q9NZD8 308 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 ANKFY1Q9P2R3 1169 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 STXBP5LQ9Y2K9 1186 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 DERAQ9Y315 318 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 NCK2O43639 380 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 LPXNO60711 386 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 RECQL4O94761 1208 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 ARHGEF15O94989 841 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 IL18RAPO95256 599 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 ALDH2P05091 517 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 THP07101 528 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 TUBBP07437 444 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 LINC00271P0C7V0 271 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 KCNE1P15382 129 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 PAX3P23760 479 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 AKAP5P24588 427 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 CXCR5P32302 372 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 MAGEA1P43355 309 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 SCNN1GP51170 649 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 KIF11P52732 1056 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 BCAR1P56945 870 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 MRPS25P82663 173 aaKnown RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 GFPT1Q06210 699 aaPredicted RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 DSC1Q08554 894 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 ADAM9Q13443 819 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 CCDC40Q4G0X9 1142 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 KCNT2Q6UVM3 1135 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 ALKAL1Q6UXT8 129 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 CDR2LQ86X02 465 aaPredicted RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 CREG2Q8IUH2 290 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 COLGALT2Q8IYK4 626 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 SLC39A11Q8N1S5 342 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 TRIM58Q8NG06 486 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 GDPD5Q8WTR4 605 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 COG1Q8WTW3 980 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 POMGNT1Q8WZA1 660 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 BAP1Q92560 729 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 MRPL38Q96DV4 380 aaKnown RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 DDX27Q96GQ7 796 aaKnown RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 SNX27Q96L92 541 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 FAM161BQ96MY7 647 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 GUCD1Q96NT3 240 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 GAD1Q99259 594 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 GBP3Q9H0R5 595 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 NRDE2Q9H7Z3 1164 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 RPF1Q9H9Y2 349 aaKnown RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 CNTN3Q9P232 1028 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 SALL4Q9UJQ4 1053 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 AGO2Q9UKV8 859 aaKnown RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 SSX2IPQ9Y2D8 614 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 FAN1Q9Y2M0 1017 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 HES2Q9Y543 173 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 CAPN6Q9Y6Q1 641 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 TDRD15B5MCY1 1934 aaKnown RBP4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 TRIOBPQ9H2D6 2365 aa4.48□□□□□ -1.69
GAPVD1-216ENST00000474637 ANO9A1A5B4 782 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 MEIS3P2A8K0S8 358 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CLGNO14967 610 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 BUB1O43683 1085 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CALUO43852 315 aaPredicted RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 EXTL3O43909 919 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ZC3H11AO75152 810 aaKnown RBP eCLIP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 TACC1O75410 805 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 FGF18O76093 207 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 NOL4O94818 638 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 PRPF6O94906 941 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 POMCP01189 267 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms