RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 GRAPLQ8TC17 118 aaPredicted RBP8.48□□□□□ -1.05
CCDC93-208ENST00000474546 TMC2Q8TDI7 906 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 JADE3Q92613 823 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 TEKT1Q969V4 418 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 COA7Q96BR5 231 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 ZNF653Q96CK0 615 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 NSL1Q96IY1 281 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 ASB2Q96Q27 587 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 ZNF184Q99676 751 aaPredicted RBP8.48□□□□□ -1.05
CCDC93-208ENST00000474546 NUDT12Q9BQG2 462 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 NUP85Q9BW27 656 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 DCLK3Q9C098 648 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 YIPF3Q9GZM5 350 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 MYLK2Q9H1R3 596 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 BHMT2Q9H2M3 363 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 EPB41L1Q9H4G0 881 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 TRABDQ9H4I3 376 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 Q9H521 79 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 KANSL2Q9H9L4 492 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 ERVK-5Q9HDB9 667 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 DDX43Q9NXZ2 648 aaKnown RBP8.48□□□□□ -1.05
CCDC93-208ENST00000474546 EURLQ9NYK6 297 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 NINJ2Q9NZG7 142 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 NARFQ9UHQ1 456 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 DBR1Q9UK59 544 aaKnown RBP8.48□□□□□ -1.05
CCDC93-208ENST00000474546 NAALADL1Q9UQQ1 740 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 EFR3BQ9Y2G0 817 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 PCDHA1Q9Y5I3 950 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 GMEB1Q9Y692 573 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 CDK5RAP2Q96SN8 1893 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 KMT2BQ9UMN6 2715 aaPredicted RBP8.48□□□□□ -1.05
CCDC93-208ENST00000474546 IQANK1A0A1B0GTG1 560 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 NKRFO15226 690 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 TGFB1I1O43294 461 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 DKC1O60832 514 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 FAM155BO75949 473 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 SPATA31C1P0DKV0 1188 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 PYGMP11217 842 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GNAT1P11488 350 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 CPA3P15088 417 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 FOSL2P15408 326 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 CA4P22748 312 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 SP100P23497 879 aaPredicted RBP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 MAGEA4P43358 317 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 MXI1P50539 228 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 RAP1GDS1P52306 607 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 ITGA8P53708 1063 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 HIRAP54198 1017 aaPredicted RBP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GEMIN4P57678 1058 aaKnown RBP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 RAB15P59190 212 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GCNT1Q02742 428 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 CBLBQ13191 982 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 LAMB3Q13751 1172 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 ADRM1Q16186 407 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 ECM1Q16610 540 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 KYNUQ16719 465 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 EPC2Q52LR7 807 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 TRIM68Q6AZZ1 485 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 ANO7Q6IWH7 933 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 TTC27Q6P3X3 843 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 POTEGQ6S5H5 508 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 C1orf186Q6ZWK4 172 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 ARHGAP22Q7Z5H3 698 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 NET1Q7Z628 596 aaPredicted RBP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 LCA5Q86VQ0 697 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 TMPRSS6Q8IU80 811 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 RCOR2Q8IZ40 523 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 OGFOD1Q8N543 542 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 ATP11CQ8NB49 1132 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 XXYLT1Q8NBI6 393 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GLIS3Q8NEA6 775 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GMCL1P1Q8NEA9 526 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 CCDC110Q8TBZ0 833 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 MGARPQ8TDB4 240 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 EPS8L1Q8TE68 723 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 DENND1AQ8TEH3 1009 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 IRGQQ8WZA9 623 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 SHC3Q92529 594 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 MAML1Q92585 1016 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 CELF1Q92879 486 aaKnown RBP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 PTPRN2Q92932 1015 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GJA10Q969M2 543 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 PPP2R3CQ969Q6 453 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GMCL1Q96IK5 515 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 NT5C1BQ96P26 610 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 RBM15Q96T37 977 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 EIF2AK1Q9BQI3 630 aaKnown RBP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GORASP1Q9BQQ3 440 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GPR88Q9GZN0 384 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 C1orf21Q9H246 121 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GOLPH3Q9H4A6 298 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 C17orf75Q9HAS0 396 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 KIAA1586Q9HCI6 787 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 UBE2TQ9NPD8 197 aaPredicted RBP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 KCNQ5Q9NR82 932 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 DDX56Q9NY93 547 aaKnown RBP8.47□□□□□ -1.05
CCDC93-208ENST00000474546 TMOD4Q9NZQ9 345 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 COQ4Q9Y3A0 265 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 UMODL1Q5DID0 1318 aa8.47□□□□□ -1.05
CCDC93-208ENST00000474546 GREB1LQ9C091 1923 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms