RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 POF1BQ8WVV4 589 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 AUTS2Q8WXX7 1259 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 MYLIPQ8WY64 445 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 ARNTL2Q8WYA1 636 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 SAMD11Q96NU1 681 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 ERGIC2Q96RQ1 377 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 PKMYT1Q99640 499 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 MRPL45Q9BRJ2 306 aaKnown RBP11.14□□□□□ -0.63
CASC3-204ENST00000474190 HERC2P3Q9BVR0 1158 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 COLEC11Q9BWP8 271 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 NAA15Q9BXJ9 866 aaKnown RBP11.14□□□□□ -0.63
CASC3-204ENST00000474190 GPR88Q9GZN0 384 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 INTS2Q9H0H0 1204 aaKnown RBP11.14□□□□□ -0.63
CASC3-204ENST00000474190 GANQ9H2C0 597 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 SMYD3Q9H7B4 428 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 SLC28A3Q9HAS3 691 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 HMGXB4Q9UGU5 601 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 PCDHB8Q9UN66 801 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 LZTS1Q9Y250 596 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 PDCD11Q14690 1871 aaKnown RBP11.14□□□□□ -0.63
CASC3-204ENST00000474190 MYO7AQ13402 2215 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 SCN1AP35498 2009 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 HIDE1A8MVS5 230 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 BECN2A8MW95 431 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 RNF225M0QZC1 329 aaPredicted RBP11.13□□□□□ -0.63
CASC3-204ENST00000474190 STX10O60499 249 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 OAZ2O95190 189 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 KRT19P08727 400 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 CTSAP10619 480 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 PRKCSHP14314 528 aaPredicted RBP11.13□□□□□ -0.63
CASC3-204ENST00000474190 LMO2P25791 158 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 PPM1AP35813 382 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 PLA2G5P39877 138 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 PIK3CAP42336 1068 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 CDH8P55286 799 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 NOP14P78316 857 aaKnown RBP11.13□□□□□ -0.63
CASC3-204ENST00000474190 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
CASC3-204ENST00000474190 SGSM1Q2NKQ1 1148 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 SARM1Q6SZW1 724 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 VPS52Q8N1B4 723 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 OR10T2Q8NGX3 314 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 FAM193BQ96PV7 902 aaPredicted RBP11.13□□□□□ -0.63
CASC3-204ENST00000474190 TWNKQ96RR1 684 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 TMEM209Q96SK2 561 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 TTYH3Q9C0H2 523 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 RXFP1Q9HBX9 757 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 RWDD3Q9Y3V2 267 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 PCDHB12Q9Y5F1 795 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 IRAK3Q9Y616 596 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 CITO14578 2027 aa11.13□□□□□ -0.63
CASC3-204ENST00000474190 GBF1Q92538 1859 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 SF3B1O75533 1304 aaKnown RBP eCLIP11.12□□□□□ -0.63
CASC3-204ENST00000474190 KIAA1671Q9BY89 1806 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 C2orf71A6NGG8 1288 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 CYB561D2O14569 222 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 SYN3O14994 580 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 TACC1O75410 805 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 TADA2AO75478 443 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 TYMPP19971 482 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 POU3F3P20264 500 aaPredicted RBP11.12□□□□□ -0.63
CASC3-204ENST00000474190 PNPLA4P41247 253 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 LRMPQ12912 555 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 GPM6BQ13491 265 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 ZNF699Q32M78 642 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 WDR72Q3MJ13 1102 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 SPOUT1Q5T280 376 aaKnown RBP11.12□□□□□ -0.63
CASC3-204ENST00000474190 FAM171A1Q5VUB5 890 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 PRSS55Q6UWB4 352 aaPredicted RBP11.12□□□□□ -0.63
CASC3-204ENST00000474190 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.12□□□□□ -0.63
CASC3-204ENST00000474190 ADGRD2Q7Z7M1 963 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 USP37Q86T82 979 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 LRRTM3Q86VH5 581 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 CREBRFQ8IUR6 639 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 GPR65Q8IYL9 337 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 TOP6BLQ8N6T0 577 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 OLIG1Q8TAK6 271 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 FEZF2Q8TBJ5 459 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 PIK3R5Q8WYR1 880 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 TAF4BQ92750 862 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 LPIN3Q9BQK8 851 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 CLSTN3Q9BQT9 956 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 C11orf84Q9BUA3 381 aaPredicted RBP11.12□□□□□ -0.63
CASC3-204ENST00000474190 NIF3L1Q9GZT8 377 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 PRDM12Q9H4Q4 367 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 GCNT4Q9P109 453 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 MAGEC2Q9UBF1 373 aaPredicted RBP11.12□□□□□ -0.63
CASC3-204ENST00000474190 CNTN6Q9UQ52 1028 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 SNX9Q9Y5X1 595 aa11.12□□□□□ -0.63
CASC3-204ENST00000474190 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
CASC3-204ENST00000474190 N4BP1O75113 896 aaKnown RBP11.11□□□□□ -0.63
CASC3-204ENST00000474190 PHACTR2O75167 634 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 WEE2P0C1S8 567 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 RPL17P18621 184 aaKnown RBP11.11□□□□□ -0.63
CASC3-204ENST00000474190 WARSP23381 471 aaKnown RBP11.11□□□□□ -0.63
CASC3-204ENST00000474190 PAX3P23760 479 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 ZNF132P52740 706 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 UBE3AQ05086 875 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms